Rhodococcus sp. RDE2: RDE2_06600
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Entry
RDE2_06600 CDS
T11469
Name
(GenBank) iron siderophore-binding protein
KO
K25286
iron-siderophore transport system substrate-binding protein
Organism
rhrd Rhodococcus sp. RDE2
Pathway
rhrd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rhrd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RDE2_06600
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhrd02000
]
RDE2_06600
Transporters [BR:
rhrd02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Iron-siderophore transporter
RDE2_06600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_2
DUF1598
Motif
Other DBs
NCBI-ProteinID:
BDB58866
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All DBs
Position
722727..723755
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AA seq
342 aa
AA seq
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MRVLERKRARGAAALGAAALLAVGLVGCSSDGDSSSAESGTDSAATRTFEAQNGSIEIPA
DPQRIVSCGYATLPLIQAGANLAAVCEWSRELDNMDEETLAAYEALPKVAPDGAVSELNY
EAVTAADPDLIIMGVPARVQEQVDVAKLEALAPVVFVGLTVPGEWRELGEQYADAANVSD
SYGEFKEEYEARAAEIADKYAGSLGGLKFAGVCGVCGTEPGEFSREYASSYTTNLFDDLG
LDFYGEPTDPEEVHSEYLSVEQLPENLGEADVIVYGVEADGSLPPELEELFASPLWQDLP
AVKAGNLVAVKHSSAATYETALLALDSIDAELAKLPANQNQE
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttctggaacgcaagcgcgcgcggggcgccgcggcgctcggcgcggcagctctg
ctggccgtcggacttgtgggatgttcgagcgacggcgacagcagcagcgcggagagcggc
accgactccgccgcgacgcgcaccttcgaagcgcagaacggcagcatcgagatcccggcc
gacccgcagcggatcgtgtcctgcggctacgcgaccctcccgctcatccaggccggcgcg
aatctggccgccgtgtgcgagtggagccgcgagctcgacaacatggacgaggagaccctc
gccgcctacgaggcgctgccgaaggtcgctcccgacggtgccgtctcggagctcaactac
gaggccgtcaccgccgccgatcccgacctcatcatcatgggcgtcccggcccgcgtgcag
gagcaggtcgatgtggccaagctcgaggcgctcgccccagtggtcttcgtcggactcacc
gttccgggcgagtggcgcgaactcggtgagcagtacgccgatgccgcgaacgtcagcgac
tcctacggggagttcaaggaggagtacgaggctcgcgctgccgagatcgccgacaagtac
gccggctcgctcgggggcctgaagttcgccggcgtctgcggtgtgtgcggtaccgagccc
ggtgagttctcccgcgagtacgcctcgtcgtacaccaccaacctgttcgacgatctcgga
ctcgacttctacggtgagccgaccgatcccgaagaggtccactccgagtacctgtcggtc
gagcagctgcccgagaacctcggcgaggccgacgtgatcgtctacggtgtcgaggccgac
ggttcgctgccgcccgagctggaggaactgttcgcctccccgctgtggcaggatctgccc
gcagtgaaggccggcaacctcgtcgccgtcaagcactccagtgcagcgacctacgaaacc
gctctgctggcactcgattccatcgatgccgagttggcgaagcttcctgccaaccagaac
caggagtag
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