Rhodococcus sp. RDE2: RDE2_18950
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Entry
RDE2_18950 CDS
T11469
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
rhrd Rhodococcus sp. RDE2
Pathway
rhrd00362
Benzoate degradation
rhrd01100
Metabolic pathways
rhrd01120
Microbial metabolism in diverse environments
rhrd01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
rhrd00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RDE2_18950
00624 Polycyclic aromatic hydrocarbon degradation
RDE2_18950
Enzymes [BR:
rhrd01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
RDE2_18950
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
DUF4198
Ig_DR_A0283-like
SdrD_B
NOMO1-like_2nd
Big_1
Motif
Other DBs
NCBI-ProteinID:
BDB60101
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All DBs
Position
complement(2054281..2055012)
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AA seq
243 aa
AA seq
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MSTGEYVERDHTLHPPALTPGYRTSVLRAPRNALITPKPTLSEITGPVFRSDELGALDND
LILNFSKDGLPIGERIIVHGFVKDEFGNPVEGALVEVWQANAGGRYRHKKDTYLAPIDPN
FGGCGRMLTDANGYYQFRTIKPGAYPWGNSRNAWRPAHIHVSILGRGWAQRLITQLYFEG
DPLIEKCPIARTIPTVDQLRSLIAQEDPASNAPFDARAYRWDITLRGRRATFFENTDLPG
APR
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccggcgaatacgtcgagcgcgaccacacgctgcacccacccgcgctcaccccc
ggctaccgcacgtcggtgctgcgcgcaccgcggaacgcgctcatcacgccgaagccgacc
ctgtcggagatcaccggccccgtcttccgcagcgacgaactcggcgccctcgacaacgac
ctgatcctgaacttctccaaggacggcctaccgatcggtgagcgcatcatcgtccacggc
ttcgtcaaggacgagttcggcaatccggtcgagggcgcactcgtcgaggtgtggcaggcc
aacgccggtggccggtaccgccacaagaaggacacctatctcgctcccatcgatccgaac
ttcggcggttgcgggcggatgctcacggacgcgaacggctactaccagttccggacgatc
aagcccggcgcatatccgtggggcaacagccgcaacgcctggcgcccggcccacatccac
gtgtcgatcctcggccgcgggtgggcgcagcgcctgatcacccagctgtacttcgagggc
gacccgctcatcgagaagtgcccgatcgcgcggacgatccccaccgtggaccagctccgc
agcctgatcgcccaggaggatcccgcctccaacgcgccgttcgacgcccgcgcctaccgc
tgggacatcaccctgcgcggtcgccgcgccaccttcttcgagaacaccgacctcccggga
gccccgcgatga
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