Rhodococcus sp. RDE2: RDE2_21860
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Entry
RDE2_21860 CDS
T11469
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
rhrd Rhodococcus sp. RDE2
Pathway
rhrd00220
Arginine biosynthesis
rhrd00240
Pyrimidine metabolism
rhrd00250
Alanine, aspartate and glutamate metabolism
rhrd01100
Metabolic pathways
rhrd01110
Biosynthesis of secondary metabolites
rhrd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rhrd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RDE2_21860 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RDE2_21860 (carB)
00220 Arginine biosynthesis
RDE2_21860 (carB)
Enzymes [BR:
rhrd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
RDE2_21860 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
BDB60392
LinkDB
All DBs
Position
2359349..2362693
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AA seq
1114 aa
AA seq
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MPRRTDLSHVLVIGSGPIVIGQACEFDYSGTQACRVLREEGLRVSLVNSNPATIMTDPEF
ADSTYIEPITADYVEKVIATEQANGTPIDAVLATLGGQTALNTAVALSERGILDKYDVEL
IGADFDAIQRGEDRQKFKDIVAKCGGESARSAVCYTMDEVRATVAELGFPVVVRPSFTMG
GLGSGMAYNDADLERIAGGGLAASPTANVLIEESILGWKEYELELMRDGADNVVIVCSIE
NVDPVGVHTGDSVTVAPAMTLTDREYQKMRDLSIAILREVGVDTGGCNIQFAMDPRDGRL
VVIEMNPRVSRSSALASKATGYPIAKMAAKLAIGYTLDEIVNDITKETPACFEPSLDYVV
VKAPRFAFEKFPGADGTLTTTMKSVGEAMSIGRNFSEAFGKVLRSLETKSAGFWTGPEVE
GTLDEILEEIRTPTDGRFYRIARALELGATVEQLFDATKIDPWFLEQFAHIVELGQDVRN
AEQFGATELRYAKHHGFSDRQIAALRPSQFASEDDVRALRQELGVHPVYKTVDTCAAEFE
AKTPYHYSTYELDPAAESEVAEQRDKPKVLILGSGPNRIGQGIEFDYSCVHAALTLSEAG
YETVMVNCNPETVSTDYDTADRLYFEPLTFEDVLEVYRAECESGTVAGVIVQLGGQTPLG
LARRLKAAGVPIVGTSPEAIDLAEDRGEFGRVLDEADLPAAKYGTATTFEGAREIAAGIG
YPVLVRPSYVLGGRGMEIVYDEKALETYISNATEISDDRPVLVDRFLDDAVEIDVDALCD
GTDVYIGGIMEHIEEAGIHSGDSACALPPITLGRADIENVRRSTAALAKGIGVKGLLNVQ
YALKDDILYVLEANPRASRTVPFVSKATAVQLAKACARVMLGESIAELRAAGILPAEGDG
SDIPLDAPVAVKEAVLPFNRFRRADGTGIDTLLSPEMKSTGEVMGLDDDFGTAFAKSQTA
AYGSLPTSGTVFVSLANKDKRSMIFPVKHLADLGFHIMATVGTAEVLRRNGVPCEQVHKV
SGEDKPEGALDVVDRIRAGDVDMVINTPWGNAGPRVDGYEIRSAAVAANIPCITTVQGAS
AAVQGIEAALRGEIGVSSIQRMHARLRGVPAEQA
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgccacgccgtaccgacctctcccacgtcctggtcatcgggtccggcccgatcgtcatc
ggacaggcctgcgagttcgactactcgggcacccaggcgtgccgggtgctccgcgaggag
ggcctgcgcgtctccctggtcaactcgaacccggccacgatcatgaccgaccccgagttc
gccgactcgacctacatcgagccgatcaccgccgactacgtcgagaaggtcatcgcgacc
gagcaggccaacggcaccccgatcgacgcggtgctcgcgaccctcggcggccagaccgcc
ctcaacaccgccgtcgccctgtccgagcgcggcatcctcgacaagtacgacgtcgaactc
atcggcgccgacttcgacgcgatccagcgcggcgaggatcggcagaagttcaaggacatc
gtcgccaagtgcggcggcgagtccgcccgctcggccgtctgctacacgatggacgaggtc
cgcgcgaccgtcgccgaactcggcttcccggtcgtcgtgcgcccctccttcacaatgggt
ggcctcggctccggcatggcctacaacgacgccgacctcgagcgcatcgccggtggcggc
ctcgcggcctcgcccaccgcgaacgtgctcatcgaggagtccatcctcggctggaaggaa
tacgagctcgagctcatgcgcgacggcgccgacaatgtcgtcatcgtctgctcgatcgag
aacgtcgacccggtcggtgtgcacaccggtgactcggtgaccgtcgctcccgcgatgacg
ctcaccgaccgcgagtaccagaagatgcgcgacctctcgatcgccatcctgcgcgaggtc
ggtgtcgacaccggcggctgcaacatccagttcgcgatggatccgcgcgacggccggctc
gtcgtcatcgagatgaacccgcgcgtgtcgcggtcgtcggcgctcgcgtcgaaggccacc
ggctacccgatcgcgaagatggccgccaagctcgccatcggctacacgctcgacgagatc
gtcaacgacatcaccaaggagaccccggcctgcttcgaaccgagcctcgactacgtcgtg
gtcaaggccccgcggttcgccttcgagaagttccccggcgccgacggcaccctcaccacc
accatgaagtcggtcggtgaggccatgtcgatcggccgcaacttctccgaggccttcggc
aaggtgctgcgctcgctcgagacgaagtccgccggcttctggacgggccccgaggtcgag
ggcaccctcgacgagatcctcgaggagatccgcacccccacggacggccggttctaccgg
atcgcccgggccctggagctcggtgcgaccgtcgagcagctcttcgacgccacgaagatc
gacccgtggttcctcgagcagttcgcgcacatcgtcgagctgggccaggacgtccgcaac
gcagagcagttcggtgccaccgagctgcgctacgccaagcaccacggattctccgaccgg
cagatcgcagccctgcgcccgtcgcagttcgcctccgaggacgacgtgcgcgccctgcgt
caggagctgggcgtccacccggtctacaagaccgtggacacctgcgccgccgagttcgag
gcgaagacgccgtaccactactcgacctacgagctcgaccccgcggccgagtccgaggtc
gcggagcagcgcgacaagccgaaggtgctcatcctcggttccggccccaaccgcatcggc
cagggcatcgagttcgactactcgtgcgtccacgccgcgctgacgctgtccgaggccggc
tacgagaccgtgatggtcaactgcaaccccgagacggtctcgaccgactacgacaccgcc
gatcgcctgtacttcgagccgctgaccttcgaggacgtcctcgaggtctaccgcgccgag
tgcgagtccggcaccgtcgccggcgtcatcgtccagctgggcggccagaccccgctcggc
ctggcgcgtcgcctgaaggccgccggggtgccgatcgtcggtacctcgccggaggccatc
gacctggcggaggaccgtggcgagttcggtcgcgtgctcgacgaggccgacctgccggcc
gcgaagtacggcacggccaccaccttcgagggtgcgcgcgagatcgccgccggcatcgga
tacccggtgctggtgcgcccgtcctacgtgctcggtggtcgcggcatggagatcgtctac
gacgagaaggcgctcgagacctacatctccaacgccaccgagatctccgacgaccggccg
gtgctcgtcgaccgcttcctcgacgacgccgtcgagatcgacgtcgacgcgctgtgcgac
ggcaccgacgtgtacatcggcgggatcatggagcacatcgaggaggccggcatccactcc
ggcgactcggcgtgtgcgctgccgccgatcaccctgggccgcgccgacatcgagaacgtc
cgccgctcgactgcggcgctcgcgaagggcatcggcgtcaagggcctgctcaacgtccag
tacgcgctcaaggacgacatcctgtacgtcctcgaggcgaacccccgtgcctcccgcacg
gtgccgttcgtgtccaaggccaccgcggtgcagctcgccaaggcctgcgcccgggtgatg
ctcggcgagtccatcgccgagttgcgtgccgcgggcatcctccccgccgagggcgacggc
agtgacatccccctcgatgcaccggtcgcggtgaaggaagcggtgctgcccttcaaccgg
ttccgacgtgccgacggcacgggcatcgacaccctgctcagcccggagatgaagtccacc
ggtgaggtcatgggcctcgacgacgacttcggaaccgcattcgcgaagagccagaccgcc
gcctacggctccctgccgacctccggcacggtcttcgtctcgctcgcgaacaaggacaag
cggtcgatgatcttcccggtcaagcacctcgccgacctgggcttccacatcatggccact
gtgggaaccgcagaggtgctgcgccgcaacggtgttccgtgcgagcaggtccacaaggtg
tccggtgaggacaagccggaaggcgcgctcgacgtcgtcgaccgcatccgtgccggcgat
gtggacatggtcatcaacaccccctggggcaacgccggtccgcgcgtggacggttacgag
atccgcagcgcggcggtcgccgcgaacatcccgtgcatcaccacggtgcagggtgcctcc
gcggccgtgcagggtatcgaggcggcactgcgcggcgagatcggagtcagctcgatccag
cggatgcacgcgcggctgcgcggcgtgcccgccgaacaggcgtga
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