Rhodococcus sp. RDE2: RDE2_22380
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Entry
RDE2_22380 CDS
T11469
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
rhrd Rhodococcus sp. RDE2
Pathway
rhrd00450
Selenocompound metabolism
rhrd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhrd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RDE2_22380
Enzymes [BR:
rhrd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
RDE2_22380
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
RDE2_22380
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
SelA
KYNU_C
Motif
Other DBs
NCBI-ProteinID:
BDB60444
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Position
2420759..2422012
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AA seq
417 aa
AA seq
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MTVPVRTLDIARIRADFPILARTVRDGKPLVYLDSGATSQRPVQVLDAEREFLATRNAAV
HRGAHALSEEATDSYEDARAVIASFVGVDVDEVVFTKNATESLNLVAYAFADDRFPHRLG
PGDEIVVTELEHHANLVPWQELARRTGATLRWYGVTDDGRIDLDSLTLTDAVKVVAFTHQ
SNVTGAVAPVEEIVRRAKEVGAIVVLDACQSVPHMAVDFRALGVDFAAFSGHKMFGPSGV
GVLYGRRDLLADVPPFITGGSMIETVTMEATTFAAPPQRFEAGSPMVSQAVGLGAAVRYL
QDIGMDAVAAHEHELTAAALAELGGIDGVRIIGPTTGEQRGGAVSFVVDGIHAHDLGQIL
DDEGVEIRVGHHCAWPLHRRFGVAATARASFAVYNTPDEVQALGAAIRRAQKFFGEA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgccggtgcggaccttggacatcgcccggatcagggccgatttcccgatcctc
gcgcgcacggtgcgcgacggcaaacccctggtctacctcgactcgggggccacctcccag
cgcccggtacaggtgctcgacgccgagcgtgagttcctcgcgacgcggaacgcggccgtg
caccgcggtgcgcacgcgttgtcggaggaggcgaccgactcgtacgaggacgctcgcgcc
gtcatcgcgtccttcgtcggggtcgacgtcgacgaggtggtgttcaccaagaacgccacc
gagtcgctcaacctcgtcgcgtacgccttcgccgacgaccggttcccgcaccggctcgga
cccggtgacgagatcgtcgtcaccgaactcgagcaccacgcgaatctcgttccgtggcag
gaactcgcgcggcgcacgggtgccaccctgcgctggtacggggtcaccgacgacggtcgc
atcgatctcgattcgctgacgctgaccgacgccgtgaaggtcgtggcgttcacgcaccag
tcgaacgtgaccggtgcggtcgctcccgtcgaggagatcgtgcggcgcgcgaaggaggtc
ggcgcgatcgtcgtgctcgacgcgtgccagtcggtgccgcacatggccgtcgacttccgt
gctctcggtgtggatttcgcggcgttctccggacacaagatgttcggtccgtccggcgtc
ggtgtcctctacggccgacgtgacctgctcgccgacgtgccgccgttcatcaccggtggc
tcgatgatcgagacggtgacgatggaggcgacgaccttcgccgcaccgccgcagcgattc
gaggccggatcgcccatggtctcgcaggccgtcggcctcggtgccgccgtgcgctacctg
caggacatcggcatggacgccgtcgccgcacacgaacacgagctgactgctgcggcactc
gccgagctgggcggtatcgacggcgtgcgcatcatcggacccacgaccggcgaacagcgc
ggcggggcggtgtcgttcgtcgtggacggaatccatgctcacgatctcggccagatcctc
gacgacgagggcgtcgagatccgggtcggacaccactgcgcctggccgctgcaccgccgc
ttcggggtggccgcgaccgcccgcgcatcgttcgccgtgtacaacacgccggacgaggtg
caggcactcggcgcggcgatccggcgcgcccagaagttcttcggggaggcgtga
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