Rhodococcus sp. RDE2: RDE2_25740
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Entry
RDE2_25740 CDS
T11469
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhrd Rhodococcus sp. RDE2
Pathway
rhrd00061
Fatty acid biosynthesis
rhrd00071
Fatty acid degradation
rhrd01100
Metabolic pathways
rhrd01212
Fatty acid metabolism
rhrd02024
Quorum sensing
rhrd04146
Peroxisome
Module
rhrd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhrd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RDE2_25740
00071 Fatty acid degradation
RDE2_25740
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RDE2_25740
09145 Cellular community - prokaryotes
02024 Quorum sensing
RDE2_25740
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhrd01004
]
RDE2_25740
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhrd04147
]
RDE2_25740
Enzymes [BR:
rhrd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RDE2_25740
Lipid biosynthesis proteins [BR:
rhrd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RDE2_25740
Exosome [BR:
rhrd04147
]
Exosomal proteins
Exosomal proteins of breast milk
RDE2_25740
Exosomal proteins of breast cancer cells
RDE2_25740
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GFIT
Other DBs
NCBI-ProteinID:
BDB60780
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Position
complement(2756077..2757735)
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AA seq
552 aa
AA seq
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MTIYGDKVWLSQYDAAQRQPRTIEFDNALAMFRATVDRNPDADIIRYFDGRITARELDEL
SDAFAAGILDAGFRPGERVAIYAQNVPQFVIAQLGTWKAGGIAVSANPMYRERELEEILR
DSGATVLVALQSLYTDVAAKVVESTDVRTVITTSELEYQTANSGTLAGVERVACAGTTDM
AEMLAAFRGRTAPPAEIGPDTVAFLTYTSGTTGPPKGAMTTHRNVAFNAQTYRDWIDIGP
DDVVLGVAPLFHITGLVGHIALSLLTGAPLVLMYRMDPADTIDTIEKQRATFTVGSITVF
IALMNAPNASKEALASLTKIYSGGAPIPPSTIAAFEERFGHYIHNIYGLTETTSPSHGVP
LGRRAPVDELTGATSVGVPVYDTVVRIVDDNGNDLPPGEVGELVTAGPQVVAGYWNNPEA
TANSIPNGVLHTGDVGYMDSDGWFYIIDRKKDQINASGYKVWPREVEDVLYEHDAVREAA
VVGVPDEYRGETVKAFVSLRPGATVTPDELIAFTKKRLAAYKCPRFVEIISDIPKTATGK
LLRRELRTATPS
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaccatctacggcgacaaggtgtggttgtcgcagtacgacgctgcgcaacggcaacca
cgcacgatcgagttcgacaatgccctggcgatgttccgggcgaccgtcgaccgcaatccg
gacgccgacatcatccgctacttcgacggccggatcaccgcacgcgaactcgacgagctg
agcgacgccttcgctgcgggcatcctcgacgccgggttccgtccaggagaacgagtcgcg
atctacgcacagaacgtgccgcaattcgtgatcgcccagctcggaacgtggaaggccggc
ggtatcgcggtgtccgccaacccgatgtaccgcgaacgcgaactcgaggagatcctgcgc
gactccggtgccacggtcctggtcgcgctgcaatccctctacaccgacgtggcagcgaag
gtcgtcgagtcgaccgacgtgcgcaccgtgatcacgacgtcggaactggagtaccagact
gcgaacagcggcaccctcgccggcgtcgaacgcgtcgcgtgcgcgggcaccacggacatg
gcggagatgctcgcggccttccggggccggaccgcccctcctgccgagatcggccccgac
acggtcgctttcctgacgtacacctccgggaccaccggcccaccgaagggcgcgatgacc
acccaccgcaacgtggcgttcaacgcgcagacctaccgggactggatcgacatcggtcca
gacgacgtcgtcctcggcgtcgcaccgctgttccacatcaccgggctcgtcggccacatc
gccctgtcgctgctgaccggtgcaccgctggtgctgatgtaccgcatggatccggccgac
accatcgacaccatcgagaagcaacgcgccacgttcaccgtggggtcgatcacggtgttc
atcgcgttgatgaacgctccgaacgcgagcaaggaggccctggcgagcctgaccaagatc
tattcgggtggcgcgccgatcccgccgagcaccatcgcggcgttcgaggagaggttcggt
cactacatccacaacatctacggcctcaccgagacgacctccccgtcacacggggtgccg
ctcggcaggcgggctccggtcgacgagctgaccggagcgacctccgtgggcgtgccggtc
tacgacaccgtcgtgcggatcgtcgacgacaacggcaacgatcttcccccgggcgaggtc
ggggagctcgtgacggcgggaccgcaggtggtggcggggtactggaacaaccccgaggcc
acggcgaactcgatcccgaacggcgtgctgcacaccggcgatgtcggctacatggacagc
gacggctggttctacatcatcgaccgcaagaaggaccagatcaacgccagtggctacaag
gtctggcctcgcgaggtcgaggacgtgctctacgaacacgacgccgttcgcgaagcagcg
gtggtgggtgtacccgacgagtaccgaggggagactgtcaaagctttcgtcagcctccgc
cccggagccacggtcacgcccgatgagctgatcgcgttcacgaagaagcgactggcggcc
tacaagtgcccacgcttcgtcgagatcatctccgacatccccaagacggcgacgggcaaa
ctgctgcgccgcgagctacgaacggcgacaccgtcctga
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