Rhodococcus sp. RDE2: RDE2_27060
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Entry
RDE2_27060 CDS
T11469
Name
(GenBank) hypothetical protein
KO
K23186
iron-siderophore transport system permease protein
Organism
rhrd Rhodococcus sp. RDE2
Pathway
rhrd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rhrd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RDE2_27060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhrd02000
]
RDE2_27060
Transporters [BR:
rhrd02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Iron-siderophore transporter
RDE2_27060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FecCD
RDD
Motif
Other DBs
NCBI-ProteinID:
BDB60912
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Position
2916706..2918124
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AA seq
472 aa
AA seq
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MTVTPHAPPDADPTAPPRPGRRIAAVLCDLALLAIPLLVGALVVDTLADANGGGQTDRIV
FGGAALAAAAGLLWWNHGYRAGRTGQSLGLQWTGLVLRDRTTTGPAGTRRALLRRGTEIV
TERHARHDDFTPRPTDSSVAALRRRRLLGLAALLVLLALGALASIAVGARPMTFAEVFHA
LVVNDGSETDVIVHSLRVPRTLLALLVGIALGVAGALIQGHTRNPLADAGLLGINAGAAF
LVVLSIYLFGLSTPAQYLWFAFAGSALASIVVFGFASIGNGGSSPLSLALAGAAVAFFLQ
AMIQTIVLLDQTSLDGYRFWVVGSVAGRGMDVFWQVLPFIVVGLLVALASTPALNLLSLG
EDVARSLGTNVVTTRVIGIAAITVLTGAATAACGPIAFVGLIVPHIARAVTGPDYRWLVP
YAGLLGGALLVLADVVGRIVVRPGELQVGIVLALIGAPFFIALVRRRKLVAL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtcaccccccacgccccaccggacgccgacccgaccgccccgccccgcccgggc
cgccggatcgccgccgtcctgtgcgacctcgcgctcctcgccatccccctgctcgtcggc
gccctcgtcgtcgacaccctcgccgacgccaacggcggcggccagaccgaccgcatcgtc
ttcggcggcgccgccctggccgccgccgccggactgctgtggtggaaccacggctaccgc
gccggccgcaccggccaaagcctgggcctgcaatggaccgggctcgtactgcgcgaccgc
accaccaccggaccggccggcacccgccgcgccctgctgcgccgcggcaccgagatcgtc
accgaacgccacgcccgccacgacgacttcaccccccgccccaccgacagcagcgtcgcc
gcgctgcgccgccggcgcctgctcggcctggccgcgctgctcgtgctgctcgcgctcggc
gcgctcgccagcatcgccgtcggcgcccgcccgatgaccttcgcggaggtcttccacgcc
ctcgtcgtcaacgacggctccgaaaccgacgtgatcgtgcactcgctgcgcgtcccccgc
accctgctcgcgctgctggtcggcatcgcgctcggcgtcgccggggcactcatccagggg
cacacccgcaacccgctcgccgacgccggcctgctcggcatcaacgccggcgccgccttc
ctcgtggtgttgtcgatctacctgttcgggctctccaccccggcgcagtacctgtggttc
gccttcgccggctccgccctcgccagcatcgtcgtgttcgggttcgcgtccatcggcaac
ggcggctcgagtccgctcagcctcgcgttggcgggcgcggcggtcgcgttcttcctgcag
gcgatgatccagaccatcgtgctgctcgaccagaccagcctcgacggctaccgcttctgg
gtggtcggctccgtcgccggccgcggcatggacgtcttctggcaggtgttgccgttcatc
gtcgtcggactgctcgtcgcgctcgcctccaccccggccctgaatctgctcagcctcggc
gaggacgtcgcccgctcgctcggcaccaacgtcgtcaccacccgggtgatcggcatcgcc
gcgatcaccgtgctcaccggcgccgccaccgccgcgtgcggaccgatcgcgttcgtcggg
ctgatcgtcccgcacatcgcccgcgcggtcaccggccccgactaccgctggctcgtgccc
tacgccgggctgctcggcggggcgctgctcgtcctcgccgacgtcgtcggccgcatcgtg
gtgcgccccggcgaactgcaggtcggcatcgtcctcgccctcatcggtgcccccttcttc
atcgccctcgtccgtcgccggaagctggtggccctgtga
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