Rhodococcus sp. RDE2: RDE2_29780
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Entry
RDE2_29780 CDS
T11469
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rhrd Rhodococcus sp. RDE2
Pathway
rhrd00470
D-Amino acid metabolism
rhrd00550
Peptidoglycan biosynthesis
rhrd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhrd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RDE2_29780 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RDE2_29780 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhrd01011
]
RDE2_29780 (murD)
Enzymes [BR:
rhrd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RDE2_29780 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rhrd01011
]
Precursor biosynthesis
Amino acid ligase
RDE2_29780 (murD)
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Ortholog
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Other DBs
NCBI-ProteinID:
BDB61184
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Position
complement(3204064..3205578)
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AA seq
504 aa
AA seq
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MTDELERLRGRAVLVAGAGVSGRATIQPLTDLGAHVTVTDRNERALAECAALGARTVDHD
SLLDDPTALREFALVVTSPGFPPDAPLLSRAAGAAIPIWGDIELSWRIDRAEVYGPARRW
LVVTGTNGKTTTTMMLHAILEAAGLGSVACGNIGLPVLDALRRDEPRADVLAVELSSFQL
HWAPSVRPEAGVVLNIAEDHLDWHGGIENYIEAKLGALTGAVGVIGLDDPIAGGLGDRSR
AVLTVGFTLGYPQEGELGISGELLVDRAFADSAVLARVDDVTPPGPAGLSDALAAAALAR
AIDVPASAVHDGLRRHRVGPHRAAPVGQVDGVEYIDDSKATNPHAARSSLLARDRVVWIA
GGLLKGARVDDLVAEVAPRLSGAVLLGRDAGEIAEALARHAPQVPVVVVDTGDDEAMTDA
TSETDTASVNATGTAPVRRAAAPGADGPAAMRVAVREAAALASPGETVLLAPAAASLDMF
ADYAERGRSFASAVEELRGGGTQP
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgaactcgaacggctcaggggacgggcggtgctcgtcgccggggcaggggtg
tccggccgcgcgacgatccaacccctcaccgatctcggcgcccacgtcaccgtcaccgac
cgcaacgagcgggcactggccgagtgcgcggcgctcggcgcccggactgtcgaccacgac
agcctcctcgacgaccccaccgcgctgcgggagttcgccctggtggtcacgagtcccgga
ttcccgcccgacgcgccgttgctctcgcgtgcggccggtgcggcgatacccatctggggc
gacatcgaactgtcctggcgcatcgaccgcgccgaggtctacggtccggcccgacgctgg
ctggtggtcaccgggacgaacggcaagaccaccaccaccatgatgctgcacgcgatcctc
gaggccgccggtctcggcagcgtcgcgtgcggcaacatcggtcttcccgtgctcgacgcc
ctgcgccgcgacgagccgcgggccgatgtcctcgccgtcgagttgtcgtccttccagctg
cactgggcgccctcggttcggcccgaggccggtgtcgtgctcaacatcgccgaggaccat
ctcgactggcacggcggcatcgagaactacatcgaggccaaactcggtgccctcaccggc
gccgtcggggtcatcggtctcgacgacccgatcgccggtggtctcggcgaccgttcccgt
gccgtcctcaccgtgggtttcaccctgggttatccgcaggagggtgaactcgggatcagc
ggagaactgctcgtcgaccgggcgttcgccgattccgctgtactcgctcgcgtggacgac
gtgacgccgcccggccccgcgggactgtccgacgccctcgcggccgccgccctcgcgcgg
gcgatcgacgtgccggcctcggcggtgcacgacggcctgcgacggcaccgcgtcggcccg
caccgcgccgcgccggtcggacaggtcgacggcgtcgagtacatcgacgactcgaaggcg
accaatccgcacgcggcccgcagttcgctgctcgcccgcgaccgcgtggtgtggatcgcc
ggtggtctgctcaagggcgcccgcgtggacgacctggtcgccgaggtggcgccacgactg
tccggagccgtgttgctcggccgcgatgccggcgaaatcgccgaagcgctggcgcgacac
gccccgcaggtcccggtcgtcgtcgtcgacacgggcgacgatgaagcgatgaccgatgcg
acgagcgagaccgacaccgcttcggtgaacgcgacaggcactgctccggtgcggagggcc
gcggcgccgggcgccgacggtcccgccgcgatgcgcgtggcggtccgggaagcggccgcg
ctcgcctcgccgggggagacggtgctgctcgcgccggccgcggcatcgctcgacatgttc
gccgattacgcggaacgcggccgtagcttcgcgtccgcggtcgaggaactccgcgggggc
gggacgcaaccgtga
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