Rhodococcus sp. RDE2: RDE2_29820
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Entry
RDE2_29820 CDS
T11469
Symbol
pbpB
Name
(GenBank) penicillin-binding protein PbpB
KO
K03587
cell division protein FtsI (penicillin-binding protein 3) [EC:
3.4.16.4
]
Organism
rhrd Rhodococcus sp. RDE2
Pathway
rhrd00550
Peptidoglycan biosynthesis
rhrd01100
Metabolic pathways
rhrd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rhrd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RDE2_29820 (pbpB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RDE2_29820 (pbpB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhrd01011
]
RDE2_29820 (pbpB)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rhrd03036
]
RDE2_29820 (pbpB)
Enzymes [BR:
rhrd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RDE2_29820 (pbpB)
Peptidoglycan biosynthesis and degradation proteins [BR:
rhrd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RDE2_29820 (pbpB)
Chromosome and associated proteins [BR:
rhrd03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
RDE2_29820 (pbpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BDB61188
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Position
complement(3210030..3211862)
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AA seq
610 aa
AA seq
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MPAPRDRTQRDRTSFTFRNKWGRLGMFGALGIAVAQLLSVQLVQAPTLSAEAASQRTTRL
VEPATRGTIADRNGEPLAYTMEAKALTFQPVRVRKELEEERAKDPSRPEVSEYLEGVASA
IHEALGAAAPEKDVLEMLESDETFVYLARGVDPGVAAEIVDEYDKVGTERQDIRLYPGGS
LAANLVGATGWDGHGLIGLEASMDAVLAGTDGSSTYDRGSDGAVIPGSWRDRQPAVDGSS
VELTIDNDLQYHVQQEVQRAKDLSGAKNASAVVLDAHTGEVLAMSNDSTFDPSIGVANNP
PDAEQGNLAVSSPFEPGSVNKIITAAAAIEDGLTRPDEVLQVPGTITMAGATVKDAWDHG
VVPYTTTGVFGKSSNVGTLMLAERIGEDRFAEMLQLFGLGQRTDVGLPGESAGLLPSREQ
WSGGTFANLPIGQGLSMTLLQMTAIYQTIANDGERVPPRVVRATIAPDGTRTETPRPDPV
RVVNPQTAATVRDMFRSVVQSDTGNQQGTGAGAAIEGYRISGKTGTAQQIDQNCKCYSNS
DYWITFAGIAPSDDPRYVVGIMLDAPTRSSDGSGGQSAAPLFRNIASWLLQRDGVPLSAE
PESKLILQVD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgccgcgcgatcgcacacagcgagaccggacgagtttcacgttccgcaacaag
tggggccggctcggcatgttcggcgctctgggcatagccgtcgcacagttgctgtccgtg
cagctcgtccaggccccgaccctgtccgccgaggcggccagccagcgcaccacccgactc
gtcgaacccgcgacccgcggcaccatcgccgatcgcaacggcgaaccgctcgcctacacg
atggaggcgaaggcgctgaccttccaacccgtgcgggtgcgcaaggaactcgaggaggaa
cgagccaaggatccgtcccggcccgaggtctcggaatatctcgagggcgtcgcgtcggcg
atccacgaggcgctcggcgctgcggcgcccgagaaggacgtgctcgagatgctcgagagc
gacgagaccttcgtgtacctcgcccgaggtgtcgatccgggggtcgcggcggagatcgtc
gacgagtacgacaaggtcggcaccgaacgtcaggacatccgtctgtatccgggcggatcg
ctcgccgccaatctcgtcggcgcgaccggctgggacgggcacggcctgatcgggctcgaa
gcgtcgatggacgccgtactggcgggtaccgacggttcgtccacctacgaccgggggtcc
gacggcgccgtcatcccgggcagctggcgcgaccgccagcccgccgtcgacggttcctcc
gtcgagctcacgatcgacaacgacctgcagtaccacgtgcagcaggaggtgcagcgcgcc
aaggacctgtccggggcgaagaacgcctccgccgtggtcctcgacgcgcacaccggcgaa
gtgctcgccatgtccaacgacagcaccttcgacccgtcgatcggtgtcgcgaacaacccg
cccgacgccgaacagggcaatctcgcggtcagttcgccgttcgaacccggatccgtgaac
aagatcatcactgccgccgcggcgatcgaggacggcctgacccgccccgacgaggtcctg
caggtccccggcacgatcaccatggccggcgcgaccgtcaaggacgcctgggatcacggg
gtcgtgccgtacaccacgacgggtgtgttcgggaagtcgtcgaacgtcggcacgctcatg
ctcgccgagcggatcggtgaggaccgcttcgccgagatgctgcaactgttcggtctcggt
cagcgcaccgatgtcggcctgcccggcgaatccgcgggtctgctgcccagccgtgagcag
tggtcgggtggcaccttcgcgaacctgcccatcggccagggtctgtcgatgaccctgctg
cagatgaccgcgatctaccagaccatcgcgaacgacggggaacgtgtcccgccgcgggtc
gtgcgcgcgaccatcgcgccggacggcacgcgcaccgagacgccccgtcccgatccggtg
cgggtggtgaacccgcagaccgccgcgacggtgcgcgacatgttccgttccgtcgtccag
tccgataccggcaaccagcagggcaccggtgcgggcgccgccatcgagggctatcggatc
tcgggcaagacgggtaccgcccagcagatcgaccagaactgcaagtgctactcgaactcc
gactactggatcaccttcgccggcatcgcgccgtccgacgatccgcgctatgtcgtgggc
atcatgctcgacgccccgacccgcagctccgacggcagcgggggccaatcggccgcgccg
ctgttccgcaacatcgcgtcgtggttgctgcagcgcgacggcgtgccgctgtcggccgaa
ccggagagcaagttgatcctccaggtcgactga
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