Rhodococcus sp. RDE2: RDE2_31890
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Entry
RDE2_31890 CDS
T11469
Symbol
gadB
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
rhrd Rhodococcus sp. RDE2
Pathway
rhrd00250
Alanine, aspartate and glutamate metabolism
rhrd00410
beta-Alanine metabolism
rhrd00430
Taurine and hypotaurine metabolism
rhrd00650
Butanoate metabolism
rhrd01100
Metabolic pathways
rhrd01110
Biosynthesis of secondary metabolites
rhrd01120
Microbial metabolism in diverse environments
rhrd02024
Quorum sensing
Module
rhrd_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
rhrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RDE2_31890 (gadB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RDE2_31890 (gadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RDE2_31890 (gadB)
00430 Taurine and hypotaurine metabolism
RDE2_31890 (gadB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RDE2_31890 (gadB)
Enzymes [BR:
rhrd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
RDE2_31890 (gadB)
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NCBI-ProteinID:
BDB61395
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Position
complement(3430065..3431444)
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AA seq
459 aa
AA seq
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MSESDAPGETLAPAFTGRLGTEPIPALRLPKSETDPEATYQFIHDELMLDGSSRLNLATF
VTTWMDPQAGRIMAETFDKNMIDKDEYPATAEIETRCVNMVADLFNADDLDPADPSSATG
VSTIGSSEAVMLGGLALKWRWREARKAAGKDASKPNLVLGSNVQVVWEKFCRYFDVEPKY
LPMEPGRYVITPEQVRDAVDENTIGVVAILGTTFTGELEPVAEIAAALDELAASGGPDVP
LHVDAASGGFVVPFLHPDLEWDFRVPRVVSINVSGHKYGMTYPGIGFVVWRSKEHLPEDL
VFRVNYLGGDMPTFTLNFSRPGNQVIGQYYNFIRLGVAGYTQIMETLRDTALMLSKQISE
IENMAIITDGSAIPVISFEVTGDPGFTVFDISHELRARGFQVPAYTMPADAEDVAVLRIV
LREGFSRDIAHKLGEDIADVVGYLREGVGRGHTDQAFAH
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtccgacgctccaggcgagacactcgcacctgccttcaccggcaggctcggt
accgaaccgattcctgctctgcggcttcccaagtcggagaccgatccggaagcgacctac
cagttcatccacgacgagctgatgctcgacggcagctcgcggctcaacctggcgaccttc
gtcaccacgtggatggatccgcaggcgggccgaatcatggccgagacattcgacaagaac
atgatcgacaaggacgagtaccccgccacggcggagatcgagacccgctgcgtcaacatg
gtcgccgacctgttcaacgcggacgacctcgatccggccgatccgtcctcggccaccggt
gtctcgacgatcggttcgtccgaggccgtcatgctcggtgggctcgcgctcaagtggcgc
tggcgtgaggcccgcaaggccgccggcaaggacgcgtcgaagccgaacctggtgctcggc
agcaacgtgcaggtggtgtgggagaagttctgccgctacttcgacgtcgagccgaagtac
ctgccgatggagcccggccgttacgtcatcacccccgagcaggtccgtgacgcggtcgac
gagaacaccatcggcgtcgtcgcgatcctcggcaccaccttcaccggtgaactcgagccc
gtcgcggagatcgccgccgcgctcgacgagctcgcggcctccggcggtcccgacgtcccg
ttgcacgtcgacgccgcctccggtggcttcgtggtgcccttcctccatccggacctcgaa
tgggacttccgtgtgccgcgggtcgtgtccatcaacgtcagtggtcacaagtacggcatg
acctatccgggcatcggtttcgtcgtctggcgttcgaaggaacatctgcccgaggacctg
gtcttccgggtcaactacctcggtggcgacatgccgacgttcacactgaacttctcgcgt
cctggtaaccaggtcatcggccagtactacaacttcatccggctcggtgtcgccggctac
acgcagatcatggagaccctgcgcgacaccgcactcatgctgtcgaagcagatctccgag
atcgagaacatggcgatcatcacggacggctccgccatcccggtcatctccttcgaggtg
acgggcgaccccggcttcacggtgttcgacatctcccacgaattgcgggcccgcggattc
caggttccggcctacacgatgccggccgacgcggaggacgtcgcggtcctgcgaatcgtg
cttcgcgagggcttcagccgggacatcgcccacaagctcggtgaagacatcgccgatgta
gtcggatatctccgcgagggtgtcggtcgcggccacaccgaccaggcattcgcacactga
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