Rhodococcus sp. RDE2: RDE2_46690
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Entry
RDE2_46690 CDS
T11469
Name
(GenBank) hypothetical protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rhrd Rhodococcus sp. RDE2
Pathway
rhrd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RDE2_46690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhrd03400
]
RDE2_46690
Enzymes [BR:
rhrd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RDE2_46690
DNA repair and recombination proteins [BR:
rhrd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RDE2_46690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
BDB62875
LinkDB
All DBs
Position
complement(5026960..5027856)
Genome browser
AA seq
298 aa
AA seq
DB search
MITTLRLPVAEPVAVGPMLASLRSHTVPDYEHHDSATGTHHRAIRTNGGAAHVAVRFDDP
ATPDGGRRGDARQLEVHVETAGRVDVEEVGETIREWLDLDVDPSVVDAAFELDPVLGPLV
QTHPGLRVVGTTDWFATAVSTVLGQQVSVAAACTFSGRLVAAFGDDAPGGLRCFPTAHRL
ATVEQSDLRAVIGTTQSRARTVSELARVAADGVAPEQPSFAADLLALPGIGPWTVDYLAL
RLGDRDAYPSGDLVLRRALQVESAREAAERAEQWRPWRAYAVTHLWTHATYSPPPSSA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccaccctgcggctcccggttgccgaacccgttgcggtggggccgatgctcgcg
tcgctgcggagccacaccgtccccgactacgaacaccacgacagcgccaccggcacccat
caccgcgcgatccgcacgaacggcggcgccgcgcatgtcgccgtccgcttcgacgacccg
gcgacacccgacggcgggagacgcggggatgcgcgacagctcgaggttcacgtcgagacc
gcaggtcgggtggatgtcgaggaggtcggcgagacgatccgagagtggctcgatctcgac
gtcgacccgtccgtcgtcgatgcggcattcgagctcgatcccgtgctcgggcctctcgtg
cagacccatcccggtctgcgcgtggtcggcaccaccgactggttcgccaccgccgtgtcg
acggtgctcgggcagcaggtgagtgtcgcagcggcatgcacattctcaggacgactcgtc
gcggccttcggcgacgacgcacccggcgggttgcggtgcttccctacggcgcaccgactc
gcaacggtggagcagagcgacctgcgtgccgtcatcggcacgacgcagtcacgtgcccgc
accgtctccgaactggctcgggtcgcagccgacggggtggcgccggagcaaccctcgttc
gcggcagaccttctcgcgctccccgggatcggaccgtggaccgtcgactatctcgctcta
cgactcggcgaccgcgacgcgtatccgtccggcgatctcgttctccgacgagccctgcag
gtggagagcgcacgcgaagccgccgagcgcgccgaacaatggcggccgtggcgcgcctat
gccgtcacccacctgtggacgcatgccacctactcgccgcccccatcctcggcgtag
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