Rhodococcus sp. RDE2: RDE2_48540
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Entry
RDE2_48540 CDS
T11469
Symbol
fadD_2
Name
(GenBank) long-chain acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhrd Rhodococcus sp. RDE2
Pathway
rhrd00061
Fatty acid biosynthesis
rhrd00071
Fatty acid degradation
rhrd01100
Metabolic pathways
rhrd01212
Fatty acid metabolism
rhrd02024
Quorum sensing
rhrd04146
Peroxisome
Module
rhrd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhrd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RDE2_48540 (fadD_2)
00071 Fatty acid degradation
RDE2_48540 (fadD_2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RDE2_48540 (fadD_2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
RDE2_48540 (fadD_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhrd01004
]
RDE2_48540 (fadD_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhrd04147
]
RDE2_48540 (fadD_2)
Enzymes [BR:
rhrd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RDE2_48540 (fadD_2)
Lipid biosynthesis proteins [BR:
rhrd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RDE2_48540 (fadD_2)
Exosome [BR:
rhrd04147
]
Exosomal proteins
Exosomal proteins of breast milk
RDE2_48540 (fadD_2)
Exosomal proteins of breast cancer cells
RDE2_48540 (fadD_2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BDB63060
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Position
complement(5212525..5214180)
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AA seq
551 aa
AA seq
DB search
MTSDFAWTQRTLSYPATSMAVWAPSLAAVYGDRPAVVDGDRVLTYNDLDARSAQFAGVLH
EAGVRARDVVLLHLGNCVEFHIAYYGALRVGAAVTLVNPLQPEPGLRRQIEETSAVAAVT
QSTQADTLLRAAEGTSVRLIAVVSDAAVTATGAVHFGDALEGRPPTFEPVVTGPDDIAHI
AYTGGTTGISKGVRVLHRNVVGNVTQMCAWRSGHQLVADVDGRISLEPIDDLDIAGVIPG
HGSTIVVSPLFHAHALINTSFLLACGLTQVLAGRFEPARMLELIERYEASYITGSPAMWH
ALAEHPDVGVRDLSTVRVVASGAAPIDRVTLEALGRAFPNARIAEGYGLTEGTCVVTSAP
LVADGGYRLGSVGLPIFDTEVQIRAQGDPSVVLGPDERGELWVRGPQVTGGYLGHPEITA
EQYVDGWLATGDIAYADADGFVFIADRAKDMLIYKGYNVYPRELEEILVTHPKVSTAAVV
GREVGAIGQEPVAFVVPVSGEEPDEEELKAYVAERVLPYKKIREVVVVDALPTSAAGKIL
KTDLRSRLTVS
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgacttccgatttcgcgtggacgcagcgcacgctgtcgtacccggcgacgtcgatggcg
gtgtgggcaccgagtctcgccgccgtctacggcgaccggcccgcagtggtcgacggtgac
cgtgtcctcacctacaacgacctcgacgcgcgatcggcgcagttcgccggtgtactgcac
gaggcaggtgtgcgcgcacgcgacgtcgtgctcctgcacctgggcaactgcgtcgagttc
cacatcgcctactacggtgcactccgcgtaggggcggcggtcacgctggtcaatccgctc
cagcccgagccgggcctgcgccgccagatcgaggagacctccgcggtggcggcggtcacg
cagtccacgcaggcggacacgctgctgcgggccgcggaggggacgagtgtccggttgatc
gccgtcgtctccgacgcggcggtcactgcgacgggtgccgtgcacttcggtgatgcgctc
gagggtcgtcccccgaccttcgaaccggtcgtcaccggaccggacgacatcgcacacatc
gcgtacaccggtggcacgaccggcatttcgaagggtgtgcgggtactgcaccgcaacgtc
gtcggcaacgtcacccagatgtgcgcgtggcggtccggtcatcagctggttgccgacgtc
gacggacggatctcgctcgagccgatcgacgatctggacattgccggcgtcatcccgggc
cacggatcgacgatcgtggtatccccgctcttccacgcgcacgcgctgatcaacacttcg
ttccttctcgcgtgcggcctgacccaggtgctcgcaggacgcttcgagccagcgcggatg
ctcgagctcatcgagcggtacgaggcgagttacatcaccggcagcccggctatgtggcat
gcgctcgcagagcatccggatgtcggggttcgggatctgtcgacggtgcgagtcgtggcg
tccggtgcggcaccgatcgatcgggtgacgctcgaagcgctcggccgggcattccccaat
gcgcggattgcggagggttatggtctgaccgaaggcacctgtgtcgtcacgtcggccccg
ctcgtcgccgacgggggataccgtctcggcagcgtcggattgccgatcttcgacacggag
gtgcagatccgtgcgcagggcgacccgtcggtcgtcctcgggccggacgagcgcggggaa
ttgtgggtgcgtggcccccaggtcaccggtggatacctcgggcacccggagatcaccgcc
gagcagtacgtcgacggctggctcgcgacgggcgatatcgcatatgcggatgccgacggc
ttcgtgttcatcgccgatcgcgcgaaggacatgctgatctacaagggctacaacgtgtat
ccgcgtgagctcgaggagatcctggtgacacacccgaaggtgtccaccgccgcagtcgtc
ggccgtgaagtgggtgcgatcggtcaggagccggtcgccttcgtcgtccccgtctccggc
gaggagcccgacgaagaggagctgaaggcatacgtcgccgaacgggtcctgccgtacaag
aagatccgcgaagtggtggtggtcgacgcactgccgacctccgccgcgggcaagatcctc
aagaccgatctgcgatcgcgcctgacggtctcctga
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