KEGG   Rhodococcoides fascians PBTS 2: A3Q41_00298
Entry
A3Q41_00298       CDS       T05030                                 
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD subunit D
  KO
K03547  DNA repair protein SbcD/Mre11
Organism
rhs  Rhodococcoides fascians PBTS 2
Brite
KEGG Orthology (KO) [BR:rhs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhs03400]
    A3Q41_00298 (sbcD)
DNA repair and recombination proteins [BR:rhs03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     A3Q41_00298 (sbcD)
    Archaeal homologous recombinant proteins
     A3Q41_00298 (sbcD)
SSDB
Motif
Pfam: Metallophos SbcD_C Metallophos_2 S-Me-THD_N
Other DBs
NCBI-ProteinID: AMY21622
UniProt: A0A143QGL9
LinkDB
Position
complement(320403..321668)
AA seq 421 aa
MGRCSRPTGRRASNSLSVVADSVVDMRILHTSDWHIGRTFHGVDLLADQGAVLESIAELV
AAQSIDVVVVPGDIYDRAVPSADAVVVCNRGLEAIRAAGAVIVATSGNHDSPARLGAGAA
FASAGGLHLMTKVGSVATPVVVDDEHGSVAFYGIPYLEPETTRVELDVPAARTHAEVLDA
AMDLVRADLAARGEAGQHVRSVVLAHAFIVGGEATGSERSISSGGIETAPASAFDGVDYV
ALGHLHSPQTLTERVRYSGSPLPYSFGERSHRKAVWILELDADGLGSVDRVDLPVVRGLA
RIEGTVEELTTHAAFSEYEDHYVSAVLTDEVRPVDAMRLLQQRFRHAIHLEWRRPEDDGG
LRYRDRVRGRSDLEIATSFLTDMRSAPTAAESALFERALASVQRETESTRTPASTVDRGA
A
NT seq 1266 nt   +upstreamnt  +downstreamnt
gtgggtcgatgctcacgcccgacaggccgacgagcctcgaatagtttgtcggtggttgcc
gatagcgtcgtcgacatgagaatcctgcacacctcggactggcacataggtcgcaccttc
catggtgtcgacctgttggccgatcagggcgcagtgctcgagtccatcgcggaactggtt
gccgcacagtcgatcgacgtggtcgtcgtcccgggtgacatctacgaccgcgccgtgccg
agcgcagatgccgtagtggtctgcaatcgcggactcgaagcgatcagagccgccggagcc
gtcatcgtcgcgacgtcgggtaaccacgattcacccgctcggttgggtgccggagctgcg
ttcgcctcggcaggcggactgcatctgatgaccaaggtcggcagcgtcgcgaccccggtg
gtcgtcgacgacgagcacggatcggttgcgttctacggcattccgtacctcgagcccgag
accacccgagtcgaactcgacgttccggcggcacggacgcatgccgaggtgctcgatgct
gccatggacctggtgcgcgccgacctcgcagcgagaggcgaagcagggcaacatgttcgg
tccgtcgtcctcgcgcatgcgttcatcgtcggcggcgaagcgacaggttcggagcgatcg
atttcgtccgggggaatcgaaaccgcaccggcatcggcattcgacggagtcgactacgtg
gccctgggtcatctgcattctccgcagacactcaccgagcgggtccggtactccggctcc
ccgttgccgtactcgttcggcgaacgctcgcaccgtaaggccgtgtggattctcgaactc
gacgccgacgggctcggcagcgtcgatcgagtggacttgccggtggttcgcggtctcgcc
cgcatcgagggcacggtcgaggaattgaccactcacgcagccttttccgaatacgaggac
cactacgtctcggcagtgctgaccgacgaggtacgtcccgttgatgcaatgcggttgctg
caacagcgttttcggcacgcgatccatctcgagtggcgtcgacccgaagacgacgggggg
cttcggtatcgcgatcgtgtccgcggccgcagcgacctcgagatcgcgacgtcgttcctg
acggacatgcgtagcgcgcccaccgcagccgagtccgcgctcttcgagcgcgcacttgct
tccgtgcagcgcgagaccgaatccacgcgcacaccggcgagcaccgtcgaccgcggcgct
gcatga

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