Rhodococcoides fascians PBTS 2: A3Q41_00638
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Entry
A3Q41_00638 CDS
T05030
Symbol
lpdC
Name
(GenBank) Dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rhs
Rhodococcoides fascians PBTS 2
Pathway
rhs00010
Glycolysis / Gluconeogenesis
rhs00020
Citrate cycle (TCA cycle)
rhs00260
Glycine, serine and threonine metabolism
rhs00280
Valine, leucine and isoleucine degradation
rhs00310
Lysine degradation
rhs00380
Tryptophan metabolism
rhs00620
Pyruvate metabolism
rhs00630
Glyoxylate and dicarboxylate metabolism
rhs00640
Propanoate metabolism
rhs00670
One carbon pool by folate
rhs00785
Lipoic acid metabolism
rhs01100
Metabolic pathways
rhs01110
Biosynthesis of secondary metabolites
rhs01120
Microbial metabolism in diverse environments
rhs01200
Carbon metabolism
rhs01210
2-Oxocarboxylic acid metabolism
rhs01240
Biosynthesis of cofactors
Module
rhs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhs_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhs_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rhs_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rhs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
A3Q41_00638 (lpdC)
00020 Citrate cycle (TCA cycle)
A3Q41_00638 (lpdC)
00620 Pyruvate metabolism
A3Q41_00638 (lpdC)
00630 Glyoxylate and dicarboxylate metabolism
A3Q41_00638 (lpdC)
00640 Propanoate metabolism
A3Q41_00638 (lpdC)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
A3Q41_00638 (lpdC)
00280 Valine, leucine and isoleucine degradation
A3Q41_00638 (lpdC)
00310 Lysine degradation
A3Q41_00638 (lpdC)
00380 Tryptophan metabolism
A3Q41_00638 (lpdC)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
A3Q41_00638 (lpdC)
00670 One carbon pool by folate
A3Q41_00638 (lpdC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhs04147
]
A3Q41_00638 (lpdC)
Enzymes [BR:
rhs01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
A3Q41_00638 (lpdC)
Exosome [BR:
rhs04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
A3Q41_00638 (lpdC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_3
FAD_oxidored
NAD_binding_8
GIDA
HI0933_like
DAO
FAD_binding_2
Thi4
Lys_Orn_oxgnase
3HCDH_N
AlaDh_PNT_C
ApbA
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
AMY21956
UniProt:
A0A143QGI1
LinkDB
All DBs
Position
complement(661094..662509)
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AA seq
471 aa
AA seq
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MTSHYDVVVLGAGPGGYVAAIRAAQLGLSTAIIEKKYWGGVCLNVGCIPSKALLRNAELA
HLFTKEAKLFGISGEASFDFGAAFDRSRKVADGRVKGIHFLMKKNKIPEYDGQGTFTDAN
TIEVELSKGGTETITFDNAIIATGSTTKLLPGTELSKNVVTYEEQIMTKDLPGSILIVGA
GAIGMEFGYVLKNYGVDVTIVEFLDRALPNEDKDVSKEIEKQYKKLGVKVITGAGVQSID
DDGSKVTVEIKHNKSGESETFTVDKVMQSVGFAPRVEGFGLEKTGVELTDRGAIGITNTM
QTNVPHIYAIGDVTAKLQLAHVAEAQAVVAAETIGGAETLPIDDYRMMPRATFCQPQVAS
FGLTEDQAREEAQARGSDIKVANFPFAANGKAHGLGDATGFVKLIADTEHGELLGGHLIG
PDVSELLPELTLAQKWDLTVNELARNVHTHPTLSEALQEAIHGLAGHMINF
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgacctcacactatgacgtcgttgtcctcggagccggtcccggtgggtacgtcgctgct
atccgcgcggcacaactcggactcagcactgccatcatcgagaagaagtactggggcggt
gtgtgcctcaacgtgggctgcatcccctcgaaggcgcttctccgtaacgccgagctggcg
cacctcttcaccaaggaggccaagctgttcggtatctcgggtgaagcatccttcgacttc
ggcgcagcattcgaccgcagccgcaaggtcgcggacggacgcgtcaagggcatccacttc
ttgatgaagaagaacaagatccccgagtacgacggccagggcacgttcaccgatgccaac
accatcgaggtcgaactgtccaagggcggcaccgagacgatcacgttcgacaacgcgatc
atcgcgaccggcagcaccaccaagctgctcccgggaaccgagctcagcaagaacgtcgtc
acgtacgaagagcagatcatgaccaaggatctgccgggatcgatcctcatcgtcggcgcg
ggcgccatcggtatggagttcgggtacgtcctgaagaactacggagtcgacgtcaccatc
gtcgagttcctcgatcgcgcgctccccaacgaggacaaggacgtctcgaaggagatcgag
aagcagtacaagaagctcggcgtcaaggtcatcaccggcgcgggtgtgcagagcatcgac
gacgacggctccaaggtcaccgtcgagatcaagcacaacaagtccggtgagagcgagacc
ttcaccgtcgacaaggtgatgcagtccgtcggattcgctcctcgcgtcgagggcttcggt
ctcgagaagaccggtgtcgagctcaccgatcgcggtgccatcggcatcacgaacacgatg
cagaccaacgtcccgcacatctacgccatcggcgacgtcaccgccaagctccagctcgcc
cacgtggcggaggcgcaggccgtggtggctgccgaaaccatcggcggcgcagagacattg
ccgatcgacgactaccgcatgatgccgcgcgccacgttctgccagccgcaggtcgcgagc
ttcggtctcaccgaggaccaggcccgcgaagaagcgcaggctcgtggatccgacatcaag
gtcgcgaacttcccgttcgccgccaacggcaaggcacacggcctgggcgacgcgacgggc
ttcgtcaagctcatcgccgacaccgagcacggtgagctgctcggtggccacctcatcgga
ccggacgtctcggagctgctgccggagctgaccctggcccagaagtgggacctgacggtc
aacgagctggcccgcaacgtccacacgcacccgacgctgtcggaggcactgcaggaagcg
atccacggcctcgcaggccacatgatcaacttctga
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