KEGG   Rhodococcoides fascians PBTS 2: A3Q41_00638
Entry
A3Q41_00638       CDS       T05030                                 
Symbol
lpdC
Name
(GenBank) Dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rhs  Rhodococcoides fascians PBTS 2
Pathway
rhs00010  Glycolysis / Gluconeogenesis
rhs00020  Citrate cycle (TCA cycle)
rhs00260  Glycine, serine and threonine metabolism
rhs00280  Valine, leucine and isoleucine degradation
rhs00310  Lysine degradation
rhs00380  Tryptophan metabolism
rhs00620  Pyruvate metabolism
rhs00630  Glyoxylate and dicarboxylate metabolism
rhs00640  Propanoate metabolism
rhs00670  One carbon pool by folate
rhs00785  Lipoic acid metabolism
rhs01100  Metabolic pathways
rhs01110  Biosynthesis of secondary metabolites
rhs01120  Microbial metabolism in diverse environments
rhs01200  Carbon metabolism
rhs01210  2-Oxocarboxylic acid metabolism
rhs01240  Biosynthesis of cofactors
Module
rhs_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rhs_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhs_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rhs_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rhs00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    A3Q41_00638 (lpdC)
   00020 Citrate cycle (TCA cycle)
    A3Q41_00638 (lpdC)
   00620 Pyruvate metabolism
    A3Q41_00638 (lpdC)
   00630 Glyoxylate and dicarboxylate metabolism
    A3Q41_00638 (lpdC)
   00640 Propanoate metabolism
    A3Q41_00638 (lpdC)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    A3Q41_00638 (lpdC)
   00280 Valine, leucine and isoleucine degradation
    A3Q41_00638 (lpdC)
   00310 Lysine degradation
    A3Q41_00638 (lpdC)
   00380 Tryptophan metabolism
    A3Q41_00638 (lpdC)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    A3Q41_00638 (lpdC)
   00670 One carbon pool by folate
    A3Q41_00638 (lpdC)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rhs04147]
    A3Q41_00638 (lpdC)
Enzymes [BR:rhs01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     A3Q41_00638 (lpdC)
Exosome [BR:rhs04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   A3Q41_00638 (lpdC)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_3 FAD_oxidored NAD_binding_8 GIDA HI0933_like DAO FAD_binding_2 Thi4 Lys_Orn_oxgnase 3HCDH_N AlaDh_PNT_C ApbA 2-Hacid_dh_C
Other DBs
NCBI-ProteinID: AMY21956
UniProt: A0A143QGI1
LinkDB
Position
complement(661094..662509)
AA seq 471 aa
MTSHYDVVVLGAGPGGYVAAIRAAQLGLSTAIIEKKYWGGVCLNVGCIPSKALLRNAELA
HLFTKEAKLFGISGEASFDFGAAFDRSRKVADGRVKGIHFLMKKNKIPEYDGQGTFTDAN
TIEVELSKGGTETITFDNAIIATGSTTKLLPGTELSKNVVTYEEQIMTKDLPGSILIVGA
GAIGMEFGYVLKNYGVDVTIVEFLDRALPNEDKDVSKEIEKQYKKLGVKVITGAGVQSID
DDGSKVTVEIKHNKSGESETFTVDKVMQSVGFAPRVEGFGLEKTGVELTDRGAIGITNTM
QTNVPHIYAIGDVTAKLQLAHVAEAQAVVAAETIGGAETLPIDDYRMMPRATFCQPQVAS
FGLTEDQAREEAQARGSDIKVANFPFAANGKAHGLGDATGFVKLIADTEHGELLGGHLIG
PDVSELLPELTLAQKWDLTVNELARNVHTHPTLSEALQEAIHGLAGHMINF
NT seq 1416 nt   +upstreamnt  +downstreamnt
gtgacctcacactatgacgtcgttgtcctcggagccggtcccggtgggtacgtcgctgct
atccgcgcggcacaactcggactcagcactgccatcatcgagaagaagtactggggcggt
gtgtgcctcaacgtgggctgcatcccctcgaaggcgcttctccgtaacgccgagctggcg
cacctcttcaccaaggaggccaagctgttcggtatctcgggtgaagcatccttcgacttc
ggcgcagcattcgaccgcagccgcaaggtcgcggacggacgcgtcaagggcatccacttc
ttgatgaagaagaacaagatccccgagtacgacggccagggcacgttcaccgatgccaac
accatcgaggtcgaactgtccaagggcggcaccgagacgatcacgttcgacaacgcgatc
atcgcgaccggcagcaccaccaagctgctcccgggaaccgagctcagcaagaacgtcgtc
acgtacgaagagcagatcatgaccaaggatctgccgggatcgatcctcatcgtcggcgcg
ggcgccatcggtatggagttcgggtacgtcctgaagaactacggagtcgacgtcaccatc
gtcgagttcctcgatcgcgcgctccccaacgaggacaaggacgtctcgaaggagatcgag
aagcagtacaagaagctcggcgtcaaggtcatcaccggcgcgggtgtgcagagcatcgac
gacgacggctccaaggtcaccgtcgagatcaagcacaacaagtccggtgagagcgagacc
ttcaccgtcgacaaggtgatgcagtccgtcggattcgctcctcgcgtcgagggcttcggt
ctcgagaagaccggtgtcgagctcaccgatcgcggtgccatcggcatcacgaacacgatg
cagaccaacgtcccgcacatctacgccatcggcgacgtcaccgccaagctccagctcgcc
cacgtggcggaggcgcaggccgtggtggctgccgaaaccatcggcggcgcagagacattg
ccgatcgacgactaccgcatgatgccgcgcgccacgttctgccagccgcaggtcgcgagc
ttcggtctcaccgaggaccaggcccgcgaagaagcgcaggctcgtggatccgacatcaag
gtcgcgaacttcccgttcgccgccaacggcaaggcacacggcctgggcgacgcgacgggc
ttcgtcaagctcatcgccgacaccgagcacggtgagctgctcggtggccacctcatcgga
ccggacgtctcggagctgctgccggagctgaccctggcccagaagtgggacctgacggtc
aacgagctggcccgcaacgtccacacgcacccgacgctgtcggaggcactgcaggaagcg
atccacggcctcgcaggccacatgatcaacttctga

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