Rhodococcoides fascians PBTS 2: A3Q41_01204
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Entry
A3Q41_01204 CDS
T05030
Symbol
rcdA_1
Name
(GenBank) HTH-type transcriptional regulator RcdA
KO
K23778
TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
Organism
rhs
Rhodococcoides fascians PBTS 2
Brite
KEGG Orthology (KO) [BR:
rhs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhs03000
]
A3Q41_01204 (rcdA_1)
Transcription factors [BR:
rhs03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
A3Q41_01204 (rcdA_1)
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_31
TetR_N
TetR_C_6
Motif
Other DBs
NCBI-ProteinID:
AMY22515
UniProt:
A0A143QH86
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All DBs
Position
1227158..1227769
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AA seq
203 aa
AA seq
DB search
MTEERRKTRYARGQERRDALVDAAIGVIGTRGLERVSFRSVADAAGFPPSTTSYFFGSVG
ELIDAAITRIAENVTAKVTALLDVAHTGGLTRDDLADAIMDLVSMLSSPEDDDSLVQFEA
YLAVRRRPELTDSVHRIMRMIEEAAEAALGAFGIPEPHLPARHFLALIDGYTLHEIARPT
PGGNRTALRDALFRVLDSYDRTT
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagagcgccgaaagactcgatacgcacgtggccaggagcgccgcgacgccctg
gtcgacgctgccatcggcgtgatcggaacgcgtggactcgaacgtgtctcgtttcggtcc
gtggccgacgccgccggcttcccgccgtcgaccaccagctatttcttcggctcggtcggc
gaactcatcgatgccgcgatcactcgaatcgctgagaacgtgacagcgaaagtgacggct
ctactcgacgtcgcgcacaccggcgggctcactcgcgacgatctcgccgacgcgatcatg
gacctcgtctcgatgctgtcctcccccgaggacgacgactccctcgtccagttcgaggca
tacctcgccgtacgcagacgacccgagctgacggattcggtgcaccgaatcatgcggatg
atcgaggaagcggccgaggcggcgctcggagcattcggcatcccggaaccacatctaccg
gctcggcatttcctggctttgatcgacggctacaccctgcacgagatcgcaaggccgaca
ccgggtggcaatcgaactgcgttgcgagacgccctgtttcgggttctggattcgtacgat
cgaacgacctga
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