Rhodococcoides fascians PBTS 2: A3Q41_01259
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Entry
A3Q41_01259 CDS
T05030
Symbol
lcfB_4
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhs
Rhodococcoides fascians PBTS 2
Pathway
rhs00061
Fatty acid biosynthesis
rhs00071
Fatty acid degradation
rhs01100
Metabolic pathways
rhs01212
Fatty acid metabolism
rhs02024
Quorum sensing
rhs04146
Peroxisome
Module
rhs_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhs00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
A3Q41_01259 (lcfB_4)
00071 Fatty acid degradation
A3Q41_01259 (lcfB_4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
A3Q41_01259 (lcfB_4)
09145 Cellular community - prokaryotes
02024 Quorum sensing
A3Q41_01259 (lcfB_4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhs01004
]
A3Q41_01259 (lcfB_4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhs04147
]
A3Q41_01259 (lcfB_4)
Enzymes [BR:
rhs01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
A3Q41_01259 (lcfB_4)
Lipid biosynthesis proteins [BR:
rhs01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
A3Q41_01259 (lcfB_4)
Exosome [BR:
rhs04147
]
Exosomal proteins
Exosomal proteins of breast milk
A3Q41_01259 (lcfB_4)
Exosomal proteins of breast cancer cells
A3Q41_01259 (lcfB_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AMY22570
UniProt:
A0A143QHQ8
LinkDB
All DBs
Position
complement(1285559..1287049)
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AA seq
496 aa
AA seq
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MLPILDASSPVLQAMYRRIDNDPDGACLSDDSTRLSNAEFGLEVDSVAAELVDAGVGAGD
VVAVLLPNRIDIITTMFAAWVLGATLTPVNPALTDDEVRYQLEDSTARVLVGSERACTLG
RAQGISFIDVDSRDRRPRTSQIDGTHRGAGPADSSAPALIVYTSGTTGRPKGCVLTHRNV
DRMSAAIVTACELTDVDTSLLVLPLFHCNGLVVGSVAPLRAGGRVHIAPRFSPDTFWDNV
ETVRPTYFSAVPTMYSLLADRGSTDRDISSLRFVICGAAPMPAGLIASFESIFGVPVVEG
YGLSECTVAATINPPNGIRKPGTVGIALPGVEIAIDTSDGPSTMPGRTGEVLVSGETVMQ
GYLGLPDVTAKTIREGWLHTGDIGVLDEDGYLVLVDRLKDMIIRGGENIAPSEIEHVLQS
HPDVLEVAVVGEAHPVYGEVPVAHVVARAGRSISVDELDAHCARSLAKFKRPTRTVVHDA
LPKNSVGKIVKKELGA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgctgccaattctcgacgcctcctcgccggttctgcaggccatgtaccgccgcatcgac
aacgacccggacggcgcgtgtctgtccgacgactccactcggttgagcaatgccgagttc
gggctcgaagtcgactcggttgccgccgaactcgtcgacgcaggggtgggagcgggtgat
gtggttgcagtcttgctcccgaatcgcatcgacatcatcaccacgatgttcgcggcatgg
gtgctgggagcaacgttgactcccgtcaatcccgcactcaccgacgacgaggtgcgctat
caactcgaggactcgaccgcccgagtgctcgtcggtagcgagcgagcctgcactctcggc
cgcgcacagggcatttcgttcatcgacgtggattctcgcgatcgtcgtccccggacgtcg
cagatcgacggcacgcatcgtggagcggggcctgccgacagctcggcaccggccttgatc
gtctacacctcgggaacgacggggcggccgaaaggctgtgtgctgactcatcgcaacgtc
gaccgaatgagcgccgcgatcgtgacggcctgcgaattgaccgatgtcgatacgagcctg
ctggtgcttccactcttccactgcaacggactcgtcgtcggctcggtcgctccgctgcga
gccggcggacgtgtgcacatcgcgcctcgtttctcgccggacacgttctgggacaacgtg
gagaccgtccggcccacctacttctccgcagtgcccaccatgtactcactgcttgcggac
cgtggatcgaccgaccgcgacatctcgtcgcttcgattcgtcatctgtggagcagcgccc
atgcctgccggcctgatcgcgtcgttcgaatcgatcttcggcgtgccggtcgtcgaaggg
tacggcctgtcggaatgcactgtggcggcaacgatcaacccgccgaacgggattcgcaag
ccgggcacggtcggcatcgcgctaccgggtgtcgagattgcgatcgatacatccgacggc
ccgagcaccatgcccggccggaccggcgaagtgttggtgagtggagagacggtcatgcag
ggatacctgggcctgccggacgtgaccgcaaagaccattcgagaggggtggttgcacacc
ggcgacatcggagtcctcgacgaggacggctatctcgtcttggtggatcgactcaaggac
atgatcattcgcggcggcgagaacatcgcgccgagcgaaatcgaacatgtcctgcaatcc
catcccgacgtcctggaagtggccgtcgtgggcgaagcgcatccggtctacggggaggtg
cccgtcgcgcacgtcgttgcacgagccggtcgcagtatctcggtcgacgagctggacgcg
cactgcgcgcggagcctggccaagttcaagcgaccgactcggacagtcgtccacgacgct
ctaccgaagaattccgtcggaaagatcgtgaagaaggagctcggcgcgtag
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