Rhodococcoides fascians PBTS 2: A3Q41_01280
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Entry
A3Q41_01280 CDS
T05030
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rhs
Rhodococcoides fascians PBTS 2
Pathway
rhs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A3Q41_01280 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhs03019
]
A3Q41_01280 (groL)
03110 Chaperones and folding catalysts [BR:
rhs03110
]
A3Q41_01280 (groL)
03029 Mitochondrial biogenesis [BR:
rhs03029
]
A3Q41_01280 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhs04147
]
A3Q41_01280 (groL)
Enzymes [BR:
rhs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
A3Q41_01280 (groL)
Messenger RNA biogenesis [BR:
rhs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
A3Q41_01280 (groL)
Chaperones and folding catalysts [BR:
rhs03110
]
Heat shock proteins
HSP60 / Chaperonin
A3Q41_01280 (groL)
Mitochondrial biogenesis [BR:
rhs03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
A3Q41_01280 (groL)
Exosome [BR:
rhs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
A3Q41_01280 (groL)
Exosomal proteins of other body fluids (saliva and urine)
A3Q41_01280 (groL)
Exosomal proteins of breast cancer cells
A3Q41_01280 (groL)
Exosomal proteins of colorectal cancer cells
A3Q41_01280 (groL)
Exosomal proteins of bladder cancer cells
A3Q41_01280 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AMY22591
UniProt:
A0A143QI47
LinkDB
All DBs
Position
1305138..1306787
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AA seq
549 aa
AA seq
DB search
MAKELRFNTEARALLEQGVNALADAVKVTLGPKGRNAVLEKLTGPPTITNDGVTIAKEIQ
LSNPFANMGAQLVKEVAMKTNGVVGDGTTTATVLAQAMVREGLRAVDAGANPMRLRRGIE
TAVSAVVDSLRAQAVEVVGNADLERIATLAASDDDAIGQCVAKAVEYVGKSGIVTTEESD
TLGMSVDVVDGIEFDHGFISGYMITDHERAEAVHENPVILLTNKKINQVQDIMPSIEAAK
RADRPLVVIAEDVDGPALQLLVGGNMHNTMQSVVVRAPGFGHRRVAELQDLAVSVGGQVI
AKDTGLELFEVSLDQLGSCDRITVTEHSTTIVGGRGDPKLLDARVAQLESQFERSKIDGD
RDSLEQRIARLTGRVAVVKVGGATSVELKERMLRVEDALAASRAALESGIVSGGGTALAQ
SHRALGELELTGDQAIGAEVVRKALTEPLRWIAINAGYEGDDVVEIVSGLPLGHGFNALT
GEYGDMFDDGVIDPFKVTRAALESAASIAALLITTETAVVEEVFGNPGAIMAPGFGDLAE
GMVRPSNIY
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagaactgcggttcaacaccgaggcgcgcgctttactggagcaaggcgtcaac
gcactcgccgacgcggtcaaggtgactctgggtccgaaggggcgcaacgccgtgctcgag
aagctcacgggcccaccgactatcaccaacgacggcgtcacgatcgcgaaagagattcag
ctcagcaacccgtttgcgaacatgggtgcgcagctggtcaaagaggtggcgatgaagacg
aacggagtggtcggcgacggaaccaccactgccaccgtgctcgcccaagcgatggtgcgg
gaggggctgcgagcagtggacgccggtgccaacccgatgcgtctgcgccgaggcatcgag
accgccgtctcggccgtcgtcgattccttgcgcgctcaagccgtcgaggtggtcggcaat
gcagacctcgagcgcatcgcaacactggcggccagcgacgacgacgccatcggccagtgc
gtggccaaagccgtggagtacgtgggcaagtcgggcatcgtcaccaccgaggaaagcgac
actctcgggatgtcggtcgacgtggtcgacggcatcgagttcgatcacgggttcatctcc
ggctacatgatcaccgatcacgagcgagcagaagccgtccacgaaaatccggtcattctg
ttgaccaacaagaagatcaaccaagtccaggacatcatgccgagcatcgaagccgcgaag
cgagcagatcgtcccctggtggtcatcgccgaggacgtcgatggaccggcgctgcagctg
ttggtcggtggaaacatgcacaacacgatgcagtccgtcgtggtgcgagcaccgggcttc
ggacatcgccgcgtcgcagaactccaggacctcgccgtgtcggtcgggggtcaggtcatc
gccaaggacaccggactcgagctgttcgaggtctcgctcgaccaactgggctcgtgcgac
cgcatcaccgtcaccgagcactcgaccaccattgtcggtggccggggggatcccaagctg
ctcgacgcacgcgtggctcagctcgagtcgcaattcgagcgctccaagatcgacggtgac
cgggacagcctcgagcagaggatcgcacgactgaccggccgggtggccgtggtcaaggta
ggcggggccaccagtgtcgagctcaaggaacgcatgctgcgtgtcgaggatgccctggcg
gcgtctcgagcagctctggaatccgggatcgtctccggcggaggtaccgcgttggcgcag
tcccatcgcgccctcggcgagttggagctgaccggagaccaggcgatcggtgccgaagtg
gtccgcaaagcgctcaccgaaccacttcgatggatcgccatcaacgccggctacgaaggc
gacgacgtcgtggagatcgtgtccggactgccactgggccatggcttcaatgcgctcacc
ggcgaatacggagacatgttcgacgacggagtgatcgatcccttcaaagtgacgcgtgcg
gcgctcgaaagtgcggcttccattgcagcgctgctgatcaccaccgaaaccgcagttgtg
gaagaggtattcggcaacccgggcgcaatcatggcccccggattcggcgatctcgccgaa
ggaatggtccgcccctcgaacatctactga
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