Rhodococcoides fascians PBTS 2: A3Q41_01413
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Entry
A3Q41_01413 CDS
T05030
Symbol
gabD2
Name
(GenBank) Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rhs
Rhodococcoides fascians PBTS 2
Pathway
rhs00250
Alanine, aspartate and glutamate metabolism
rhs00310
Lysine degradation
rhs00350
Tyrosine metabolism
rhs00650
Butanoate metabolism
rhs00760
Nicotinate and nicotinamide metabolism
rhs01100
Metabolic pathways
rhs01120
Microbial metabolism in diverse environments
Module
rhs_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
rhs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
A3Q41_01413 (gabD2)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
A3Q41_01413 (gabD2)
00310 Lysine degradation
A3Q41_01413 (gabD2)
00350 Tyrosine metabolism
A3Q41_01413 (gabD2)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
A3Q41_01413 (gabD2)
Enzymes [BR:
rhs01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
A3Q41_01413 (gabD2)
1.2.1.20 glutarate-semialdehyde dehydrogenase
A3Q41_01413 (gabD2)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
A3Q41_01413 (gabD2)
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Motif
Pfam:
Aldedh
LuxC
Motif
Other DBs
NCBI-ProteinID:
AMY22721
UniProt:
A0A143QIH4
LinkDB
All DBs
Position
complement(1443345..1444898)
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AA seq
517 aa
AA seq
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MPAPSTATFSRLADLIAIPDADSRPTKTITEVFTGKELATIPVGTAADALAAIVRVRTAQ
AAWAKRPVSERAEIFHRYRDLVLAHRDELMDMAQAETGKSRAAALEEVLDISMTSRHYAR
TAAKLLAPKKVTGMLPVLTKTRVRYQPKGVVGIISPWNYPMTLAVSDAIPALLAGNGVVL
KPDSQTPYCALACVELLYKAGLPRDLFAVVPGPGSVVGTAIVENTEYVMFTGSTATGQLL
AEQAGRRLIGFSAELGGKNAMIVAKGANLREVSDAAVRACFSNSGQLCISIERIYVEKSI
AAEFTEKFGQRVRNMTVGADYEFGIEMGSLISEDQIKTVSAHVDDAKVKGATVVAGGKAR
PDIGPLFYEPTLLTNVTEDMECAATETFGPLVSIYPVADVDEAIAKANDTDYGLNASVWA
KTKAQGEAIAARLHAGTVNVDEGYAPTWGTTGAPMGGMGVSGMGRRHGNEGLLKYTEPQT
IATTRLLNLGGPRGLPPKLWAKIMPPFVKALKYIPGR
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctccgtccactgcgaccttttcccggctcgctgatctcatcgccattcccgac
gcggactcgcgtcccaccaagacgatcaccgaggtgttcaccggtaaggagctggcgacc
attccggtcggtacggctgcagatgccctggctgcgatcgttcgcgtccgtaccgctcag
gcggcctgggccaagcgtccggtctccgagcgcgcagagatcttccaccgctaccgcgac
ctggtgctcgcgcaccgcgacgagctcatggacatggcgcaggccgagacgggcaagtcc
cgcgccgccgccctcgaggaagtcctcgacatctcgatgacctcgcggcactacgcacgc
acggccgccaaactgctggccccgaagaaggtcaccggcatgcttcccgtgctgaccaag
actcgcgttcggtaccagcccaagggtgtcgtcggaatcatctcgccgtggaactacccg
atgactctcgcggtgtccgacgccattccggcgctgctggccggcaacggcgtcgtgctc
aagcccgacagccagacgccgtactgcgcattggcctgcgtcgagctgctctacaaggcc
ggtctgccccgcgacctgttcgccgtggtccccggccccggctcggtggtgggcaccgcg
atcgtcgagaacaccgaatacgtcatgttcaccggctccacggccaccggtcagctcctg
gccgagcaggcggggcgtcgactcatcggtttctccgccgagctcggcggcaagaacgcc
atgatcgtcgccaagggcgcgaacctgcgggaagtatccgacgcggcagtgcgcgcctgc
ttctccaactccggtcagctctgcatctccatcgagcgcatctacgtcgagaagtcgatc
gccgccgagttcaccgagaagttcggccagcgggtacgcaacatgaccgtgggtgccgac
tacgagttcggcatcgaaatgggcagcctcatctccgaggaccagatcaagacggtctcg
gcgcacgtcgacgacgccaaggtcaagggcgctaccgtcgtcgcgggcggcaaggcgcgt
cccgacatcggcccgctgttctacgagccgacgttgctgacgaacgtcaccgaggacatg
gagtgtgcggcgaccgaaaccttcgggccgctggtgtcgatctaccccgtcgccgacgtc
gacgaggccatcgcgaaggccaacgacaccgactacggattgaacgcgagcgtctgggcc
aagacgaaggcgcagggcgaggccattgccgcacgtctgcacgcgggcacggtcaacgtc
gacgagggttacgcgccgacgtggggcaccaccggtgcgccgatgggcggaatgggcgtc
tccggcatgggccgtaggcacggaaacgagggactgctcaagtacaccgagccgcagacc
atcgcgacgacccgcctgctcaatctcggtggaccgcgcggacttccgccgaagctgtgg
gcaaagatcatgcctcccttcgtcaaagcgctgaagtacatacccggccggtag
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