Rhodococcoides fascians PBTS 2: A3Q41_01434
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Entry
A3Q41_01434 CDS
T05030
Symbol
phr
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rhs
Rhodococcoides fascians PBTS 2
Brite
KEGG Orthology (KO) [BR:
rhs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhs03400
]
A3Q41_01434 (phr)
Enzymes [BR:
rhs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
A3Q41_01434 (phr)
DNA repair and recombination proteins [BR:
rhs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
A3Q41_01434 (phr)
Prokaryotic type
A3Q41_01434 (phr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AMY22742
UniProt:
A0A143QJS1
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All DBs
Position
1461036..1462256
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AA seq
406 aa
AA seq
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MSQLPAPPSIADGFTTDDVVSWVAEHLGDLTLEGPDDIAPGGIRGGQSAADAALASLDIT
GYARDRSTVLPANRRGASRMSPYIRHGLLTLREVWDAVADAPARDRTRYRDELMWQEYAR
HLYARVGTDLGRSLRREQPRPHNWTSEPWPDEMNCMSKVVGELHSDGWLVNQTRMWLASQ
WAVRAGATWRDGEDEMFTHLLDGSRAANRLGWQWTVGTGSGKVYGFSRWQVNKRAPSLCR
NCALKDACPIENWPDDDLGPAVAGPDLNKAPVPAGPATMEGDGAEQVWLTAESLGTTDPA
MAANPERPAVFVFDEPLLHKLRLSGKRLVFLAETLGEIASTRPLEVRRGRVADELSGRSL
AATWAPVPGFSRIADAIAPVELHPWPWLTRPTTSSVRSFSAWRRSH
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagctccccgctcccccgtcgatcgccgacggcttcaccaccgacgacgtcgtt
tcctgggttgccgagcatctgggcgacctgacgctcgagggaccggacgacatagctccg
ggtggcattcgcggcggacaatccgcggccgatgccgcgctggcgagcttggacatcacc
ggctacgcccgcgaccgcagcactgtccttcctgcgaatcgtcgtggagccagtcgaatg
tcgccgtacatccggcacggtctgctcactctccgtgaggtgtgggacgccgtagcggac
gcccctgcgcgcgatcgcacgcggtaccgggacgaactcatgtggcaggaatacgcccgc
cacctctatgcccgcgtcggaaccgatctggggagatcccttcgtcgtgaacaaccacga
ccgcacaactggacctccgaaccctggcccgacgagatgaactgcatgtccaaggtggtg
ggcgaattgcacagtgacggttggctcgtcaaccaaacacgcatgtggctggcgtcccaa
tgggctgtgcgtgccggcgcgacatggcgcgacggcgaggacgagatgttcacccacttg
ctcgacggctcacgggcggccaatcgattgggttggcaatggacggtcggtaccggaagc
ggcaaggtgtacggcttcagtcggtggcaggtgaacaagcgcgcaccatccctgtgccgc
aactgcgcgctgaaagacgcctgccccatcgagaattggcccgacgatgatctcggaccg
gcagtcgccggacccgatctcaacaaagcaccggtacccgcgggccccgcgaccatggaa
ggtgatggtgcggaacaggtctggctgaccgccgaatcgctcggcaccacagaccccgcc
atggctgcgaatcccgagcgacctgccgtcttcgtgttcgacgaaccactcctgcacaag
cttcggctgtccggaaagcgactggtgtttctcgccgagaccctcggcgagatcgcgtcg
acccggccgttggaggtacgccgcggccgagtagcagatgagctttccggacggtctctg
gccgccacctgggcacctgttcccggtttctctcgcatcgccgacgccatcgccccggtc
gaattgcatccatggccctggctgacgcgtcccaccacatcctcggtccggtcgttcagt
gcgtggcggcgcagtcactga
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