Rhodococcoides fascians PBTS 2: A3Q41_01538
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Entry
A3Q41_01538 CDS
T05030
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rhs
Rhodococcoides fascians PBTS 2
Brite
KEGG Orthology (KO) [BR:
rhs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhs03032
]
A3Q41_01538 (gyrB)
03400 DNA repair and recombination proteins [BR:
rhs03400
]
A3Q41_01538 (gyrB)
Enzymes [BR:
rhs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
A3Q41_01538 (gyrB)
DNA replication proteins [BR:
rhs03032
]
Prokaryotic type
DNA Topoisomerases
A3Q41_01538 (gyrB)
DNA repair and recombination proteins [BR:
rhs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A3Q41_01538 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AMY22842
UniProt:
A0A143QK43
LinkDB
All DBs
Position
complement(1561140..1563182)
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AA seq
680 aa
AA seq
DB search
MAAQKSGNSENSKDYGASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEA
MAGYASTVDVTIHEDGSVEVKDDGRGIPVAMHSSGVPTVEVVMTQLHAGGKFDSDSYAVS
GGLHGVGISVVNALSTKVELQIARDGHRYKQTYDYAKPGPLETVGDTTETGTTVRFWADG
KIFETLDYSFETVHRRLQEMAFLNKGLTINFTDERVAATDATEEELGETAEAPKTAEEEQ
ADAANAKPAKVRKRTYHYPDGLVDFVKHINRTKTAIHNSVVGFTGKGEGHEVEIAMQWNA
GYSESVHTFANTINTHEGGTHEEGFRTALTSTVNKYAIEKKLVKEKDVKLTGDDIREGLA
AVISVRVGEPQFEGQTKTKLGNTEIRSFVQKACNEHLSHWFESNPADAKTIINKAVSSAQ
ARMAARKARELVRRKSATDIGGLPGKLADCRSNDPSKSEIYIVEGDSAGGSAKSGRDSMF
QAILPLRGKIINVEKARIDRVLKNNEVQSIITAFGTGIHDEFDIAKLRYHKIVLMADADV
DGQHISTLLMTLLFRFMRPLIENGHVYLAMPPLYKLKWSRGEPDFAYSDRERDGLLEAGL
ANKRKINVEDGVQRYKGLGEMNAKELWETTMDPAVRVLRLVTLDDAAAADELFSVLMGED
VSARRSFIARNAKDVRFLDV
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
gtggctgcccagaagtcaggtaacagtgagaacagcaaggattacggcgcttcgtccatc
acggtcctcgagggcctggaagcagtccgtaagaggcccggtatgtacatcggttccacc
ggtgaacgaggcctgcaccacctgatctgggaggtcgtcgacaactccgtcgacgaggcc
atggccggctacgcctccaccgtcgacgtcaccatccacgaagacggcagcgtcgaggtc
aaggacgacggccgcggcatccccgtcgccatgcactcctccggtgttcccaccgtcgag
gtcgtcatgacccagctgcacgccggtggcaagttcgactccgactcctacgccgtctcc
ggcggtctgcacggcgtcggtatctccgtcgtgaacgcactctcgaccaaggtcgaactg
cagatcgcgcgtgacggtcaccgctacaagcagacctacgactacgccaagcccggccca
ctcgagaccgtcggcgacaccacggagaccggcaccacggtccggttctgggccgacggc
aagatcttcgagaccctcgattacagcttcgagaccgtgcaccgtcgcctgcaggagatg
gcgttcctcaacaagggactgaccatcaacttcaccgacgagcgagtcgcggccaccgac
gcgaccgaggaagaactcggcgagaccgccgaggcacccaagaccgccgaggaagagcag
gccgacgcggccaacgcgaagccggccaaggttcgtaagcggacgtaccactacccagac
ggtctggtggacttcgtcaagcacatcaaccgcaccaagaccgcgattcacaactcggtc
gtcggcttcaccggcaagggtgagggccacgaggtcgagatcgccatgcagtggaacgct
ggttactccgaatcggtgcacaccttcgccaacacgatcaacacgcacgagggcggtacc
cacgaagagggtttccgtaccgcgctgacgtcgacggtgaacaagtacgccatcgagaag
aaactggtcaaggaaaaggacgtcaagctcaccggcgacgacatccgcgaaggcctcgcc
gccgtcatctcggtgcgggtcggggagccccagttcgagggacagaccaagaccaagctc
ggcaacaccgagattcgctcgttcgtgcagaaggcgtgcaacgagcacctctcgcactgg
ttcgagtccaacccggccgatgccaagaccatcatcaacaaggcggtctcgtccgcgcag
gcccgcatggccgcgcgtaaggcgcgagagttggtgcggcgcaagagcgcaaccgatatc
ggtggcctgcccggcaagctcgcagactgccgctcgaacgatccgagcaagtccgagatc
tacatcgtggagggcgactccgccggcggctcggccaaatccggccgtgactcgatgttc
caggccatcctgccgctgcgcggaaagatcatcaatgtcgagaaggcccgcatcgaccgc
gtcctcaagaacaacgaggtccagtcgatcatcaccgcgttcggcaccggcattcacgac
gagttcgacatcgccaagctgcgctatcacaagatcgtgctgatggccgacgccgacgtc
gacggccagcacatctccaccctgctgatgaccctgttgttccggttcatgcggccgctg
atcgagaacggacacgtctacctggccatgccgccgctgtacaagctcaagtggagtcga
ggcgaaccggatttcgcgtactccgaccgcgagcgcgacggtctgctcgaggccggtctg
gccaacaagcgcaagatcaacgtcgaggacggcgtccagcgctacaaaggcctcggcgag
atgaacgccaaggaactgtgggaaaccacgatggacccggcagtgcgagttcttcgtctg
gtcactctcgacgatgccgcggccgcggacgaactgttcagcgtcctgatgggcgaggac
gtgtccgcccgccgaagcttcatcgcgcgtaacgcgaaagatgttcgctttcttgacgtt
tag
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