Rhodococcoides fascians PBTS 2: A3Q41_03272
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Entry
A3Q41_03272 CDS
T05030
Symbol
exoA
Name
(GenBank) Exodeoxyribonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rhs
Rhodococcoides fascians PBTS 2
Pathway
rhs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A3Q41_03272 (exoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhs03400
]
A3Q41_03272 (exoA)
Enzymes [BR:
rhs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
A3Q41_03272 (exoA)
DNA repair and recombination proteins [BR:
rhs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
A3Q41_03272 (exoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Glyco_transf_5
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AMY24563
UniProt:
A0A143QN38
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All DBs
Position
3395478..3396314
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AA seq
278 aa
AA seq
DB search
MSVASATVVGVPITISTVNVNGIRAAVRKGMLPWLEATDADVICLQETRANDGELTTALA
PALDAGWHLASAEPSAKGRNGVALLSRAAPEAIRTGIGVAEFADAGRYIEGDYGDVTVAS
LYLPSGEVGTDRQDEKERFMAAFAKYLAKTAKATTSAERDVVVCGDWNIAHTEADLKSWK
TNRKKSGFLPEEREWVSRLLAEKSPWTDVVRELHPGVEGPYSWWSYRGKAFDNDAGWRID
YQLATSDLAERAKEAVTERAEAYDQRWSDHAPVTVRYR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
ttgtcggtggcctccgctacggtcgtcggcgtgccgatcactatttccactgtcaacgtc
aacgggatccgcgccgctgttcgcaagggcatgcttccgtggctcgaggccaccgatgcc
gacgtcatctgtcttcaggagacgcgggccaacgacggcgagctgaccacagcactggcc
ccggccctcgatgcggggtggcatctggcgtcggcggaaccgtcggcgaagggacgcaac
ggcgtggccctgctgtcgagggccgcgccggaggcgatcagaaccggcatcggagtcgct
gaattcgccgacgcgggtcgctacatcgaaggagactacggtgacgtcaccgtggcgagc
ctgtacctgccgtcgggcgaggtggggaccgaccgacaggacgagaaggaacgcttcatg
gcggcgttcgcgaagtatctcgccaagaccgccaaggcaacgacgtccgccgagcgcgac
gtcgtggtctgcggcgactggaacatcgcccacaccgaagcggatctgaagtcgtggaag
accaaccgcaagaagtcgggtttcctccccgaagaacgtgagtgggtatcgcgattgctc
gccgagaagtcaccgtggaccgacgtcgtgcgtgagctgcaccccggcgtcgaggggccg
tacagctggtggtcctaccgcggcaaggcgttcgacaacgacgccgggtggcgcatcgac
taccaactcgccacaagtgatctggccgagcgtgcgaaagaagctgtcaccgaaagagcg
gaggcgtacgaccagcggtggtccgatcacgcgccggtgacggtgcgctaccgctag
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