KEGG   Rhodococcoides fascians PBTS 2: A3Q41_03433
Entry
A3Q41_03433       CDS       T05030                                 
Symbol
uvrD2
Name
(GenBank) ATP-dependent DNA helicase UvrD2
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
rhs  Rhodococcoides fascians PBTS 2
Pathway
rhs03420  Nucleotide excision repair
rhs03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rhs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A3Q41_03433 (uvrD2)
   03430 Mismatch repair
    A3Q41_03433 (uvrD2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhs03400]
    A3Q41_03433 (uvrD2)
Enzymes [BR:rhs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     A3Q41_03433 (uvrD2)
DNA repair and recombination proteins [BR:rhs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A3Q41_03433 (uvrD2)
   MMR (mismatch excision repair)
    Other MMR factors
     A3Q41_03433 (uvrD2)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 HRDC UvrD_C_2 AAA_30 HHH_5
Other DBs
NCBI-ProteinID: AMY24724
UniProt: A0A143QP72
LinkDB
Position
3569490..3571604
AA seq 704 aa
MADDAMTAGLDPEQSAAVLAPRGPVCVLAGAGTGKTRTITRRIAHLVSAGHVSSGQVLAV
TFTARAAGEMRGRLRELGVGGEGPPVQARTFHAAAMRQLKYFWPQVVGDTGWQLLDRKFT
VVSQAANRAGVSTSTDAIRDLAGEIEWAKGSLIAPEDYPRIAASNRRDVPMDAAKVAAVY
AGYEELKSRGGDGMLLDFDDLLLHTAAALEEHSSVADEFRERYRCFVVDEYQDVTPLQQR
VLDAWVGDRDDLTVVGDANQTIYSFTGASPRYLLDFSRKYPEATVVRLERDYRSTPEVVS
LANRVIGAARGRIAGTRLQLIGQRDSGPEPEFFEYDDEPAEADGVARAVKRLISKGVEPA
EIAILYRINAQSEAHEQALTELKIPYQVRGGEGFFTRPEVRQGVNALRQAAGRDDLPDGS
RSGDGLTGLVRAVLAPLGLTATEPTGAQAREKWASLGGLVQLTEELLVHDPELTLDSLLG
ELAARAEARHPPTVQGVTLASLHAAKGLEWDAVFIVGLADGTLPISHAIGNDPSANNEAA
VEEERRLLYVGVTRARVHLHLSWALARNEGGRKSRRRSRFLVGLVPEDSPASRIAAPAAK
RSGPKCRICGKPLIGTSATMLGRCDSCPSNVDIALLDALKSWRLDKSRELKVPAYVVFSD
NTLTAIAEQQPQDERGLVAIPGIGAKKLERFGEDVLTVVRSSDR
NT seq 2115 nt   +upstreamnt  +downstreamnt
atggctgacgacgcgatgactgccggtctcgatccggagcaatccgcggcagtgctggct
cctcgtggtccggtctgtgtgctcgccggggccggaacgggcaagactcgcacgatcact
cgacgcatcgcgcatctcgtgtccgcggggcacgtgtcctccggccaggtgttggcggtc
accttcaccgcgcgggcggccggtgagatgcgcggccgtcttcgagaactcggcgtcggg
ggagagggccctccggtgcaggctcgtaccttccacgctgccgcgatgcgccagctcaaa
tatttctggccacaggtcgtcggcgacaccgggtggcagttgctcgatcgcaaattcacc
gtggtctcgcaggcggcgaaccgggccggagtgtccacctccaccgacgccatccgcgac
cttgcgggcgagatcgagtgggcgaaaggctcgttgatcgctcccgaggactacccgcgc
atagcggcgagcaaccgacgcgacgtgcccatggacgcagccaaggtcgctgcggtgtac
gcgggatacgaagaactcaaatctcgcggcggcgacggcatgttgctcgacttcgacgat
ctgctgctgcacaccgccgcggcgctcgaagagcactcctcggtggccgacgaattccgc
gaacgctatcgctgcttcgtcgtcgacgagtatcaggacgtgacgccgctccaacagcgg
gttctcgacgcctgggtgggcgatcgtgacgacctcaccgtcgtcggggatgcgaatcag
acgatctactcgttcaccggagcgtcccctcgctacctgctcgacttctctcgcaagtat
cccgaggccaccgttgtccgtctcgaacgtgactaccgatcgacaccggaggtcgtgtcg
ttggccaatcgcgtgatcggtgccgcgcggggtcgcatcgcgggcactcggctgcagctg
atcggtcagcgtgattccggtccggagccggagttcttcgagtacgacgacgagcccgcc
gaagcggacggagtggcacgcgcggtgaagaggttgatctcgaaaggcgtcgagcctgcc
gagatcgcaattctgtaccgcatcaatgcgcagtccgaggcgcacgagcaggccctgacc
gagctgaagattccctatcaggttcgcggcggcgagggtttcttcactcgacccgaagtg
cggcagggagtcaatgcactgcgccaggctgctggccgagacgatctacccgacggttct
cgttccggggacggcctgaccggtctggttcgggccgtgctggctccactggggttgacc
gctaccgagccgaccggtgcgcaggcgcgggagaagtgggcctccctgggaggtctcgtg
caactcaccgaggaattgttggtgcacgaccccgaactgaccctcgactcacttctcggt
gaactcgcggctcgcgccgaggcgcgacatccaccgacggtgcagggcgtgacgctggcc
tcgctgcatgcggcgaaggggctcgagtgggatgcagtgttcatcgtcgggcttgccgac
ggaacgctgccgatatctcacgcgatcggcaacgatcccagtgcgaacaacgaggccgcc
gtcgaggaagagcgtcgccttctctacgtgggtgtcacccgggcgcgggtccacctgcac
ctgtcgtgggccctggcccgtaacgagggtgggcgcaagtcgcgtcgccgctcccgattc
ctcgtcggattggtgcccgaggattcgcccgcgtcgcgcatcgcggcacccgcggccaag
aggtcggggcccaagtgcagaatctgcggtaagccgttgatcggcacgtcggccacgatg
ctcggacgatgcgatagctgcccgtccaacgtggacatcgccctgctcgacgcgttgaag
tcgtggcgcctggacaagtctcgtgaactcaaggtgcccgcatacgtcgtgttcagtgac
aacacgttgactgctatcgccgaacagcaaccgcaggacgagcgtgggcttgttgcgata
ccgggaatcggggccaagaagctcgagcgcttcggcgaggacgtgctcacggtggtgcgg
tcctccgaccggtaa

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