Rhodococcoides fascians PBTS 2: A3Q41_03433
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Entry
A3Q41_03433 CDS
T05030
Symbol
uvrD2
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhs
Rhodococcoides fascians PBTS 2
Pathway
rhs03420
Nucleotide excision repair
rhs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A3Q41_03433 (uvrD2)
03430 Mismatch repair
A3Q41_03433 (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhs03400
]
A3Q41_03433 (uvrD2)
Enzymes [BR:
rhs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A3Q41_03433 (uvrD2)
DNA repair and recombination proteins [BR:
rhs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A3Q41_03433 (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
A3Q41_03433 (uvrD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AMY24724
UniProt:
A0A143QP72
LinkDB
All DBs
Position
3569490..3571604
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AA seq
704 aa
AA seq
DB search
MADDAMTAGLDPEQSAAVLAPRGPVCVLAGAGTGKTRTITRRIAHLVSAGHVSSGQVLAV
TFTARAAGEMRGRLRELGVGGEGPPVQARTFHAAAMRQLKYFWPQVVGDTGWQLLDRKFT
VVSQAANRAGVSTSTDAIRDLAGEIEWAKGSLIAPEDYPRIAASNRRDVPMDAAKVAAVY
AGYEELKSRGGDGMLLDFDDLLLHTAAALEEHSSVADEFRERYRCFVVDEYQDVTPLQQR
VLDAWVGDRDDLTVVGDANQTIYSFTGASPRYLLDFSRKYPEATVVRLERDYRSTPEVVS
LANRVIGAARGRIAGTRLQLIGQRDSGPEPEFFEYDDEPAEADGVARAVKRLISKGVEPA
EIAILYRINAQSEAHEQALTELKIPYQVRGGEGFFTRPEVRQGVNALRQAAGRDDLPDGS
RSGDGLTGLVRAVLAPLGLTATEPTGAQAREKWASLGGLVQLTEELLVHDPELTLDSLLG
ELAARAEARHPPTVQGVTLASLHAAKGLEWDAVFIVGLADGTLPISHAIGNDPSANNEAA
VEEERRLLYVGVTRARVHLHLSWALARNEGGRKSRRRSRFLVGLVPEDSPASRIAAPAAK
RSGPKCRICGKPLIGTSATMLGRCDSCPSNVDIALLDALKSWRLDKSRELKVPAYVVFSD
NTLTAIAEQQPQDERGLVAIPGIGAKKLERFGEDVLTVVRSSDR
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgacgcgatgactgccggtctcgatccggagcaatccgcggcagtgctggct
cctcgtggtccggtctgtgtgctcgccggggccggaacgggcaagactcgcacgatcact
cgacgcatcgcgcatctcgtgtccgcggggcacgtgtcctccggccaggtgttggcggtc
accttcaccgcgcgggcggccggtgagatgcgcggccgtcttcgagaactcggcgtcggg
ggagagggccctccggtgcaggctcgtaccttccacgctgccgcgatgcgccagctcaaa
tatttctggccacaggtcgtcggcgacaccgggtggcagttgctcgatcgcaaattcacc
gtggtctcgcaggcggcgaaccgggccggagtgtccacctccaccgacgccatccgcgac
cttgcgggcgagatcgagtgggcgaaaggctcgttgatcgctcccgaggactacccgcgc
atagcggcgagcaaccgacgcgacgtgcccatggacgcagccaaggtcgctgcggtgtac
gcgggatacgaagaactcaaatctcgcggcggcgacggcatgttgctcgacttcgacgat
ctgctgctgcacaccgccgcggcgctcgaagagcactcctcggtggccgacgaattccgc
gaacgctatcgctgcttcgtcgtcgacgagtatcaggacgtgacgccgctccaacagcgg
gttctcgacgcctgggtgggcgatcgtgacgacctcaccgtcgtcggggatgcgaatcag
acgatctactcgttcaccggagcgtcccctcgctacctgctcgacttctctcgcaagtat
cccgaggccaccgttgtccgtctcgaacgtgactaccgatcgacaccggaggtcgtgtcg
ttggccaatcgcgtgatcggtgccgcgcggggtcgcatcgcgggcactcggctgcagctg
atcggtcagcgtgattccggtccggagccggagttcttcgagtacgacgacgagcccgcc
gaagcggacggagtggcacgcgcggtgaagaggttgatctcgaaaggcgtcgagcctgcc
gagatcgcaattctgtaccgcatcaatgcgcagtccgaggcgcacgagcaggccctgacc
gagctgaagattccctatcaggttcgcggcggcgagggtttcttcactcgacccgaagtg
cggcagggagtcaatgcactgcgccaggctgctggccgagacgatctacccgacggttct
cgttccggggacggcctgaccggtctggttcgggccgtgctggctccactggggttgacc
gctaccgagccgaccggtgcgcaggcgcgggagaagtgggcctccctgggaggtctcgtg
caactcaccgaggaattgttggtgcacgaccccgaactgaccctcgactcacttctcggt
gaactcgcggctcgcgccgaggcgcgacatccaccgacggtgcagggcgtgacgctggcc
tcgctgcatgcggcgaaggggctcgagtgggatgcagtgttcatcgtcgggcttgccgac
ggaacgctgccgatatctcacgcgatcggcaacgatcccagtgcgaacaacgaggccgcc
gtcgaggaagagcgtcgccttctctacgtgggtgtcacccgggcgcgggtccacctgcac
ctgtcgtgggccctggcccgtaacgagggtgggcgcaagtcgcgtcgccgctcccgattc
ctcgtcggattggtgcccgaggattcgcccgcgtcgcgcatcgcggcacccgcggccaag
aggtcggggcccaagtgcagaatctgcggtaagccgttgatcggcacgtcggccacgatg
ctcggacgatgcgatagctgcccgtccaacgtggacatcgccctgctcgacgcgttgaag
tcgtggcgcctggacaagtctcgtgaactcaaggtgcccgcatacgtcgtgttcagtgac
aacacgttgactgctatcgccgaacagcaaccgcaggacgagcgtgggcttgttgcgata
ccgggaatcggggccaagaagctcgagcgcttcggcgaggacgtgctcacggtggtgcgg
tcctccgaccggtaa
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