Rhodococcoides fascians PBTS 2: A3Q41_03855
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Entry
A3Q41_03855 CDS
T05030
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
rhs
Rhodococcoides fascians PBTS 2
Pathway
rhs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A3Q41_03855 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhs03400
]
A3Q41_03855 (ruvB)
Enzymes [BR:
rhs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A3Q41_03855 (ruvB)
DNA repair and recombination proteins [BR:
rhs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A3Q41_03855 (ruvB)
RecFOR pathway proteins
A3Q41_03855 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
TIP49
AAA_5
Mg_chelatase
AAA_16
RNA_helicase
nSTAND3
AAA_3
AAA_14
Resolvase
Cdc6_lid
Zeta_toxin
HTH_AsnC-type
IstB_IS21
AAA_33
Sigma54_activ_2
Rad17
Motif
Other DBs
NCBI-ProteinID:
AMY25137
UniProt:
A0A143QRX1
LinkDB
All DBs
Position
4001375..4002451
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AA seq
358 aa
AA seq
DB search
MTEDDEFGESQVGAEAMSDDLDIETSLRPKNLTDFIGQPRVREQLQLVLSGAKMRGGTPD
HILMSGPPGLGKTSMAMIIAAELGTSLRLTSGPALERAGDLAAMLSNLVEGDVLFIDEIH
RIARPAEEMLYLAMEDFRVDVIVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFG
FVAHMDFYEPSELERILMRSAGILGVPIDRDGCAEIAGRSRGTPRIANRLLRRVRDYADV
RGDGTVTQDTAKAALVVYDVDKLGLDRLDRAVLSALIRSFGGGPVGVSTLAVAVGEEPST
VEEVCEPFLVRAGMIARTPRGRVATAAAWHHLGLTPPPDLAVGGISVRSAEVQQGLFE
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaggacgacgagttcggggaatctcaggtcggtgcggaggccatgtccgacgac
ctcgacatcgagaccagtctgcgtccgaagaacctcaccgatttcatcggtcagcctcgg
gtgcgtgagcaactgcagctggtgctctcgggggcgaagatgcgcggcggcacccccgat
cacatcctgatgtcgggtccgcccgggctgggaaagaccagcatggcgatgatcatcgcc
gcagagctcggcacgtcactgcggttgacctccgggcccgccctcgagcgtgcgggcgat
ctagccgcgatgctcagcaacctcgtcgaaggggacgttctgttcatcgacgagattcat
cggatcgcccggccggccgaggaaatgttgtatctggccatggaggacttccgtgtcgac
gtgatcgtcggcaaggggccgggagcgacgtcgattccgttggaagtcgccccattcact
ctggtcggtgcaacgacccggtccggcgccctcaccggaccgctgcgcgaccgcttcggg
ttcgtggcgcacatggatttctacgagcccagtgaactcgaacgaatcctgatgcgatcc
gctgggattctgggtgtccccatcgaccgcgacggctgcgccgagatcgcaggacgctcg
cgtggcacaccccgaatcgcgaaccggctgctgcgccgagttcgcgactacgcggacgtg
cgcggggacggcaccgtcacccaggacaccgccaaggccgcgctcgtggtctacgacgtg
gacaagctcggactggatcgcctcgaccgtgccgtcctcagcgcgctgatccgaagtttc
ggcgggggaccggtgggagtgtccactctcgctgtcgccgtcggcgaggagccctcgacg
gtcgaggaagtgtgtgagccgttcctggtacgggccgggatgatcgcccgcacgccgcgc
ggtcgcgtcgccaccgccgccgcctggcaccacctcggtctcaccccgccgccggacctc
gcagtcgggggaatttcggtgcgatcggccgaggtccagcagggattattcgagtga
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