Rhodococcoides fascians PBTS 2: A3Q41_03901
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Entry
A3Q41_03901 CDS
T05030
Symbol
priA_1
Name
(GenBank) putative primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rhs
Rhodococcoides fascians PBTS 2
Pathway
rhs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A3Q41_03901 (priA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhs03400
]
A3Q41_03901 (priA_1)
Enzymes [BR:
rhs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A3Q41_03901 (priA_1)
DNA repair and recombination proteins [BR:
rhs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A3Q41_03901 (priA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
AMY25183
UniProt:
A0A143QPS9
LinkDB
All DBs
Position
4056641..4058665
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AA seq
674 aa
AA seq
DB search
MAGVTPVAATDLPIARILPLLPLPHLDREFDYLVPEDASDDAQPGVRVRVRFAGRLVDGF
VLARLAETDHPGRLGWLDRVVSAERVLTPEIAELVSAVADRYAGTRADVLRLAVPARHAR
VEAEPPPVVDEAAEPVVDRTGWAAYTHGSNFLDALGEHRVPRAVWQALPGEVWPARLAEL
AAVTVGSGRSGVVVVPDQRDLDRLEGACAAAVGADRVVALSAGLGPAKRYRQWLRCLRSG
PVVVVGTRSAVFAPVSNLGLIAIWDDGDDSFAEPRSPYPHAREVALLRAHVSGAAVVVGG
HSRTAEAEALVDSGWAHDLVAPRELVRERQPHVVALADSDHALARDPAARVARLPAIAFE
AARAALKADTPVLVQVPRAGYVPSLACAKCRHPARCRRCNGPLALPSAPGSDGAGSPTCS
WCGIADAAHRCTVCGSRNLRAVVIGAGRTAEELGRAFPGVPIHNSGGATVLDTVRPGGSL
VVSTVGAEPTVDGGYGAALLLDGWALLGRADLRAAEETLRRWMTAASMVRPGSAGGRVVV
VAESEIPTVQALVRWDPLWHARSQLDERVEVRFPPAVHVAAIDGTTDAISALVESADLPE
TVEVLGPVDLPDGQRAPAGSGEDGLSGDVQRLLIRVPRSTGAALARALSTAQASRSAKKL
GAGVRIQIDPIRIG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
gtggctggtgtgacgccggtagcggcaaccgatctgccgatcgcgcgcattcttccgttg
cttccgctgccgcacctcgaccgcgagttcgattacctcgttcccgaggacgccagcgac
gatgcccagcccggtgtgcgggtgcgcgttcgttttgccggccggcttgtcgacgggttc
gtactcgccaggctggccgagaccgaccatcccggtcgtctcggctggctcgaccgggtc
gtgtccgccgagcgcgtactgactcccgagatcgccgagttggtgtcggcggtggccgat
cgctacgcaggaacgcgagcggatgtgctgcgtctggcggttccggctcgccacgcacgg
gtcgaggcagagccccctccggtcgtcgacgaggcagcagagccggtcgtcgatcgcacg
ggctgggcggcgtatacccatggctccaatttcctcgatgcccttggcgagcaccgtgtt
ccgcgtgcggtgtggcaggccctgcccggcgaggtgtggcccgctcgattggccgaattg
gctgccgtcacagtggggagcggacggtccggagtggtcgtggtgcccgaccaacgggat
ctcgatcgtctggagggcgcgtgcgctgcggcagtcggggccgaccgtgtcgtggcgctg
tcggccggtttgggaccggccaagcggtaccggcaatggttgcgctgtctgaggtcgggc
cccgttgtcgtggtgggcacacgcagtgcggtgttcgcgcccgtgtcgaacctcggcctg
atcgcgatctgggacgacggcgacgacagtttcgccgaaccacgctcaccgtatccgcat
gcacgtgaggtggcgttgctccgcgcccatgtgtcgggagctgcggtcgtcgtcggcgga
cattcccggacggccgaggccgaggctctcgtcgattccggctgggcccacgacctggtc
gccccacgtgagctggtgcgtgaacggcaacctcacgtggtcgcgctggccgactcggac
cacgcgctcgctcgggatccggcggcccgggtcgcacggctaccggcgatcgctttcgag
gccgcacgtgcggcgctgaaagcggatacccctgtgctggttcaggttccacgcgccggc
tatgttccgtcgctggcgtgtgcgaagtgccgccatccggctcggtgtcgacgctgcaac
ggtccgctcgccctgccctcggctccgggcagcgacggcgcgggcagcccgacgtgttcc
tggtgcggaatcgccgatgccgcacaccgctgcacggtctgcgggtcgcgcaacctgcgc
gccgtggtgatcggagcgggacgcacggccgaggagctcggccgcgccttccctggcgtg
ccgatacacaactccggtggggccaccgtcctcgataccgtgcgccccggtggctcgctc
gtggtgtcgaccgtcggtgccgagccgaccgtggacggcggatacggcgccgcgctgctg
ctcgacggttgggcgctgctgggccgggcggatctgcgtgcggcagaagagacactgcgc
cgctggatgacggctgcgtcgatggttcggcccgggtcggccgggggccgtgtggtcgtg
gtggccgagtccgagatccccaccgtccaggccctggtgcgctgggatccgctgtggcac
gcgcgcagtcagctggacgaacgagtcgaggttcggtttccaccggccgttcacgtggcg
gcgatcgacgggaccaccgacgcgatatcagcgttggtcgagagtgcagatctacccgag
acggtcgaggtgctgggtcccgtcgatctcccggacggtcaacgcgcaccggcgggtagt
ggcgaggacgggttgtccggagacgtgcagcggctcctgatccgggttccgcgaagcacc
ggagcagcgctggcgcgagcgctgtcgactgcgcaggcgtcccgaagcgccaagaagctc
ggcgcgggcgtacggattcagatcgatcccattcggatcgggtga
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