Rhodococcoides fascians PBTS 2: A3Q41_04009
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Entry
A3Q41_04009 CDS
T05030
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
rhs
Rhodococcoides fascians PBTS 2
Brite
KEGG Orthology (KO) [BR:
rhs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rhs03051
]
A3Q41_04009 (pafA)
Enzymes [BR:
rhs01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
A3Q41_04009 (pafA)
Proteasome [BR:
rhs03051
]
Prokaryotic proteasome
Bacterial regulatory particles
A3Q41_04009 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
AMY25290
UniProt:
A0A143QQJ7
LinkDB
All DBs
Position
4179839..4181182
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AA seq
447 aa
AA seq
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MGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGSHPEYA
TAECDSLLQLVTHDRAGERVLEDLLIDAEQRLAEEGIGGDIYLFKNNTDSAGNSYGCHEN
FLVQRAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAATFCLSQRAEHIWEGVSSATTR
SRPIINTRDEPHADAEKYRRLHVIVGDSNMAETSTMLKVGTAALVLEMIEAGVSFRDFAL
DNPIRAIREVSHDLTGRRPVRLAGGRQASALEIQREYYSRAVEHLQTREPNAQVTQVVDL
WGRTLDAIESQDFAKVDTEIDWVIKRKLFERYQDRYSMELSDPKIAQLDLAYHDIKRGRG
VFDVLQRKGLVKRVTEDEQIDEAVNLPPQTTRAKLRGEFITAAQEAGRDFTVDWVHLKLN
DQAQRTVLCKDPFRSVDERVERLIASM
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcgagaccgagttcggtgtcacatgtacctttcacggacaccgacgcctgagt
ccggacgaggtggcccgttacctcttccgtcgcgtggtctcgtggggccgcagctcgaat
gtgttcctccgcaacggcgctcgcctctatctcgacgtcggttcgcatcccgagtacgcc
actgccgaatgcgacagcctgctgcaattggtcacccatgatcgcgcaggcgagcgagta
ctcgaggatttgctgatcgacgccgaacagcgtctcgccgaggagggcatcggcggagac
atctacctgttcaagaacaacaccgattcggcgggcaactcctacggttgccacgagaat
ttcctcgtccagcgagcgggcgaattctcgcgcatctcggatgtactcctaccttttctg
gtcacccgccaattgatctgtggcgcaggcaaggtgctgcagacacccaaggccgcgacg
ttctgcctctcgcagcgcgccgagcacatctgggaaggcgtgtcgtcggccaccactcgt
tcgcggccgatcatcaacacccgcgacgaaccgcacgccgatgccgagaagtatcgccgg
ctccacgtcatcgtcggcgattccaacatggccgagacctcgaccatgctcaaggtgggg
acggccgcactcgtactcgagatgatcgaggcaggcgtctcgttccgagacttcgcgctg
gacaatccgattcgggccattcgcgaggtcagccacgatctgaccggtcgcaggccggtc
cgcctcgccggcggtcgccaggccagtgcactcgaaatccagcgtgagtactactcccgg
gccgtcgagcatctccagacgcgggagcccaatgctcaggtgacccaggtggtggacctg
tggggacgcacactcgatgccatcgagtcgcaggacttcgccaaggtcgacaccgaaatc
gactgggtcatcaaacgcaagctgttcgagcggtatcaggaccgctactcgatggaactt
tccgatcccaagatcgctcagctcgatcttgcgtaccacgacatcaagcgtggacgggga
gtgttcgacgtgctgcagcgcaagggtctggtcaagcgagtcaccgaggacgagcagatc
gacgaagcggtgaatctgccgccgcagacgacacgcgcgaagctgcgaggtgagttcatc
accgccgcccaggaagccggacgcgacttcaccgtcgactgggtacacctgaaactcaac
gatcaagcgcagcgaacggtgttgtgcaaggacccgttccgttcggtcgacgagcgcgtc
gagcgactcatcgcatcgatgtag
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