Rhodococcoides fascians PBTS 2: A3Q41_04267
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Entry
A3Q41_04267 CDS
T05030
Name
(GenBank) hypothetical protein
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rhs
Rhodococcoides fascians PBTS 2
Pathway
rhs00500
Starch and sucrose metabolism
rhs01100
Metabolic pathways
rhs01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rhs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
A3Q41_04267
Enzymes [BR:
rhs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
A3Q41_04267
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
GHL5
Motif
Other DBs
NCBI-ProteinID:
AMY25543
UniProt:
A0A143QQU8
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All DBs
Position
4478696..4480987
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AA seq
763 aa
AA seq
DB search
MLHDASDDTPAIAVWPGSPYPLGATYDGAGTNFALFSEVAEAVDLCLIAEDGTETRIRFE
ESDGYVWHAYLPTVVPGQRYGYRVHGPWDPAAGHRCDPSKLLVDPYGKAFEGSFDGDRSL
FSYNIDIPAAEPEPVESPDSAAADPLDAEVRFEDATDLADPDGEIVDESPIAHDDEPNND
FPQHDSLGHTMTTVVINPFFDWQADRAPKRPYHETVIYEAHVKGMTITHPDIPEAERGTY
AGLAHPVIIEHLQHLGVTAIELMPVHQFMQDQVLLDKGLRNYWGYNTFGFLAPHAEYSSH
QSPGAAVTEFKAMVRSFHAAGIEVILDVVYNHTAEGNHMGPTISFRGIDNAAYYRLVDGD
LEHYMDYTGTGNSLNARHPHTLQLIMDSLRYWVTEMHVDGFRFDLASTLARELHDVDRLS
AFFDLVQQDPVVSQVKLIAEPWDVGEGGYQVGNFPGLWTEWNGKYRDTVRDYWRGEPATL
GEFASRLTGSSDLYEATGRRPGASINFVIAHDGFTLNDLVSYNDKHNEANGEDNNDGESH
NRSWNCGVEGPTDDPEILDLRARQIRNIMATLLLSQGTPMIAHGDELGRTQQGNNNVYCQ
DSELAWMDWSLAETNADLIEFTRNAIALRNEHPVFRRRRFFEGRPIRSGEQARDIAWLTP
AGEEMTPEDWDSGFGKSLTVFLNGEGIPEPNQRGERVVDDSFLLCFNAHHETIEFVTPDG
NYAKEWTVALDTAARTGAGEKSIEAGTPVEVTARSLLVLRKTA
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacgacgcctccgacgacacgcccgccatcgccgtatggccgggatccccttat
ccactgggagcgacctacgacggagcaggaaccaatttcgccttgttctccgaggtcgcc
gaggccgtggacctgtgcctgatcgccgaggacggtaccgaaactcgtattcgtttcgag
gagtccgacggctacgtgtggcacgcgtacctgcccacggtggtgccgggacaacgctac
ggctaccgcgtccacgggccgtgggatccggctgccggacatcgttgtgatcccagcaag
ttgctggtcgatccttacggaaaagcattcgaggggtcgttcgacggagaccgatcgctc
ttctcctacaacatcgacatcccggccgccgaacccgagcccgtggagtccccggactcc
gcagccgcggatccactcgacgccgaggtccggttcgaggacgcgaccgacctcgccgat
ccggacggcgaaatcgtggacgagtccccgatcgcccacgacgacgagccgaacaacgat
ttccctcagcacgattcgctgggacacacgatgaccaccgtggtgatcaaccccttcttc
gactggcaggccgaccgcgcaccgaagaggccgtatcacgaaacggtgatctacgaggcc
cacgtcaagggcatgacgatcacccatccggacatccccgaggccgagcgcggcacctat
gccggtctggcacatccggtgatcatcgagcatctgcagcacctgggcgtcaccgcgatc
gagctgatgccggtgcaccagttcatgcaggaccaggtactcctggacaagggactgcga
aactactggggctacaacaccttcggattcctcgcgcctcatgcagagtattcctcgcat
cagtcgcccggtgccgcggtgaccgaattcaaggcgatggtccgttcgttccacgccgcc
ggcatcgaggtgatcctcgacgtggtctacaaccacaccgccgagggaaaccacatgggc
cccaccatcagcttccgcggcatcgacaacgcggcctactaccgactggtcgacggcgat
ctcgagcactatatggactacaccgggacgggcaacagtctcaatgctcgacacccgcac
acgctgcagctcatcatggactcgctgcgctactgggtcaccgagatgcacgtcgacgga
ttcaggttcgacctcgcatccaccctggcccgtgaactgcacgacgtggatcggctgagc
gcgttcttcgatctggtgcaacaggacccggtcgtcagccaggtcaagctgatcgccgag
ccgtgggatgtcggcgagggcggataccaggtgggtaacttccccggtctgtggaccgag
tggaacggcaagtaccgtgacaccgttcgcgactactggcgcggtgagcccgcgacgctg
ggcgagttcgcgtcgcgcctgaccggatcgtcggatctctacgaggcgacgggccgtcgc
cccggtgccagcatcaacttcgtcatcgcgcacgacggcttcaccctcaacgacctggtc
tcgtacaacgacaagcacaacgaggccaacggcgaggacaacaacgacggcgagagccac
aaccggtcgtggaactgcggcgtcgagggtccgaccgacgatcccgagatcctcgatctg
cgggcccgccagattcgcaacatcatggccacgctgctgctcagccaaggcacgccgatg
atcgcgcacggcgacgaactcggccgaactcagcagggcaacaacaacgtctactgccag
gattcggaactggcgtggatggattggtccctggccgagaccaacgccgacctgatcgag
ttcacccgcaacgcaattgcgctgcgcaacgagcacccggtgtttcgccgtcgccgattc
ttcgagggcaggcccatccgatcgggcgaacaggcacgtgacatcgcctggctcaccccc
gcaggcgaggagatgactcccgaggactgggacagcggtttcggcaaatcgctcaccgtg
ttcctcaacggtgagggcattcccgagccgaatcagcgcggggagcgggtggtcgacgac
tcgttcctgttgtgcttcaacgcacatcacgagacgatcgaattcgtcactccggacgga
aactacgccaaggaatggacggtcgccctcgatacggcagcgcgcacgggagcgggtgag
aaatcgatcgaagcgggtacaccggtggaggtcaccgctcgatccctactcgttctacga
aagactgcctga
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