Rhodococcoides fascians PBTS 2: A3Q41_04335
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Entry
A3Q41_04335 CDS
T05030
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhs
Rhodococcoides fascians PBTS 2
Pathway
rhs03030
DNA replication
rhs03430
Mismatch repair
rhs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A3Q41_04335 (polC)
03430 Mismatch repair
A3Q41_04335 (polC)
03440 Homologous recombination
A3Q41_04335 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhs03032
]
A3Q41_04335 (polC)
03400 DNA repair and recombination proteins [BR:
rhs03400
]
A3Q41_04335 (polC)
Enzymes [BR:
rhs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A3Q41_04335 (polC)
DNA replication proteins [BR:
rhs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A3Q41_04335 (polC)
DNA repair and recombination proteins [BR:
rhs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A3Q41_04335 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
UVR
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AMY25611
UniProt:
A0A143QRM1
LinkDB
All DBs
Position
4555354..4557099
Genome browser
AA seq
581 aa
AA seq
DB search
MSEVGPNVVAVSLPIQLTFDELDTPLHATTFVVVDLETTGGSADTEAITEIGAVKVRGGE
IIGEFATLVDPGRSIPPYIVELTGITTAMLIGAPRIERVLPGFLEFARGSVLVAHNAGFD
TGFLKAAASRLDIAWPRFQVLCTVKLARRVLTRDEAPSVKLSALSTLFRSSTRPTHRALD
DARATVDVLHGLIERVGNQGVHSYAELVDYLPAVSAGQRAKRGLAAHLPDTPGVYLFRGP
SDEVLYVGTSNNLKRRVRNYFTGSETRGRMKEMVSLATRVDHVECAHAIEAGVRELRLLS
AHVPPYNRRSKFPRKGWWVTLTDEAFPRLSIVRTPAPNSLGPFTVRADAAEASALVAEFC
RLRTCTRRLSRAVRHGDECTATDVGGCPAAFSGPLTAEEYSGAPAKFLAFVCGHDDELLF
AMRRRVAELADRELFETAARLRDRIAVTVNVLRRMHRAAAVAAIAELVAARRTADGGWEL
MVVRFGRLAGAAVAPRGVHPMPVVDAITASAETVMPDATPLRGAPPEEVGLIASWLHTDG
VRIVRTSSGYCSPARSAGSWEEWCRTAREATRQEWSPRNDR
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
ttgtcggaggtcggccctaacgtcgtcgcagtgagcctgccgatccagctgacgttcgac
gaactcgacaccccgcttcacgccaccacgttcgtcgtcgtcgacctcgaaaccaccggt
ggcagcgctgacacggaggcgatcaccgaaatcggggcagtcaaggtcaggggcggcgag
atcatcggcgaattcgctaccctcgtcgacccgggcagatcgatcccgccctacatcgtc
gagttgaccggcatcacgacggcgatgctgatcggggctccccgcatcgaacgcgttctc
cccggctttctcgagttcgctcgcggatcggtactggtggcacacaacgccgggttcgac
acgggatttctcaaagctgcagcgagtcgactcgacatagcctggccccgcttccaggtg
ctctgcacggtcaaactcgcccggcgagtgctcacgcgcgacgaggcaccctcggtgaaa
ctgtccgccctgtcgacgttgttcagatccagcactcggccgactcaccgagcattggac
gacgcgcgtgccacggtggacgtgctgcacggcctgatcgaacgagtgggcaaccagggc
gtacacagctacgcggaactggtcgactacctccctgcggtgtcggcggggcaacgagcc
aaacgcggcctggccgcacacctgcccgatacacccggcgtctacctcttccgaggaccg
tcggacgaggtcctgtacgtgggcacctcgaacaacctcaagcgtcgggtgcgcaactac
ttcaccggttccgagacacgtgggcgaatgaaggagatggtctcgctcgccactcgcgtg
gaccacgtcgaatgtgcgcacgcaatcgaggcaggagtccgcgaattacggctgctctcg
gctcacgtcccgccttacaaccgccgatcgaagtttccccgcaaaggatggtgggtcact
ctcaccgacgaagcgtttccgcgtctgtcgatcgtgcgcactcccgcacccaacagcctc
ggaccgttcactgttcgggcggacgcggcggaggcctccgccctcgtcgcggaattctgt
cgacttcgtacatgcacccgccggttgagccgcgcggttcgacacggtgacgagtgcacc
gcgacggacgtcggtggctgcccagcggcgttctccgggcctctgacggccgaggagtac
tcgggtgccccggcgaaatttctggcgttcgtgtgtggacacgacgacgagctgctgttc
gcgatgcgacgccgcgtcgccgaactcgcggaccgtgaactgttcgagacagccgcgcgt
ctccgcgatcgaatcgcggtgacggtgaacgtgctccgcaggatgcaccgggcggccgcc
gttgcggccatcgccgagctcgtggcggccaggcggacggccgacggtggttgggagctg
atggtggtgcgcttcggccgcttggccggggcggccgtcgcaccgcgaggggtgcacccg
atgcccgtcgtcgatgcgatcacggcgtcggccgagacggtgatgcccgatgcgacgcca
cttcgcggtgcgcctccggaagaggtgggcctgatcgcgtcgtggctccatacggacggg
gtgcgcatcgttcgcaccagcagtggctactgcagccctgctcggtctgcgggttcgtgg
gaggagtggtgtcgaacggcccgagaagcaacgcggcaggagtggagcccgcggaacgac
cgatga
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