Rhodococcoides fascians PBTS 2: A3Q41_04513
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Entry
A3Q41_04513 CDS
T05030
Symbol
sigF
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
rhs
Rhodococcoides fascians PBTS 2
Brite
KEGG Orthology (KO) [BR:
rhs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhs03021
]
A3Q41_04513 (sigF)
Transcription machinery [BR:
rhs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A3Q41_04513 (sigF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_24
MarR
DUF7343
HTH_3
MarR_2
Sigma70_ECF
HTH_Crp_2
HTH_28
KORA
HTH_31
DUF7116
Trypco1
SP2_C
Motif
Other DBs
NCBI-ProteinID:
AMY25786
UniProt:
A0A143QSL6
LinkDB
All DBs
Position
complement(4745201..4745986)
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AA seq
261 aa
AA seq
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MPVPQERSTRRESDDYSDVVALIQQMQALDENSPQRSVLRDRIITRCLPLAEHIARRFGG
RGEAHEDLLQVSRLGLVNAVDRFDIERGSDFVSFAVPTIMGEARRYFRDAGWSVRVPRRM
KELNSMISQAVGSLSQKLGRAPTASEIAAELGIDVKEASQALLARSAYQTVSVDSVVSED
RLPLMDTLGADDPELEKMESYLAVRPALEKLPERERRIVVLRFFGSMTQTQIAEKVGISQ
MHVSRILARTLAQLREDLGED
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
gtgccggtgccgcaggaacgaagcacacggcgagagtccgacgattacagcgacgtggtc
gcgctgatccagcagatgcaggcgctggacgagaattcaccgcagcgttccgtgctgcgt
gaccgcatcatcacgcgctgccttcctctcgccgaacacatcgcgcgccgattcggtggg
cgcggtgaagcgcacgaggacctcttgcaggtgtccaggctgggtctggtcaatgcagtc
gaccggttcgacatcgagcgtgggtcggatttcgtctcgttcgccgtccccaccatcatg
ggcgaagcacgtcgctacttccgcgacgccggctggtcggtacgggtaccgcgacgcatg
aaagagctgaactccatgatctcgcaggcggtgggatcgttgtcgcagaagctcggtcgc
gccccgaccgcgagcgaaatcgccgccgaactcgggatcgacgtcaaggaagcatcgcag
gcactgcttgcccgcagcgcgtatcagaccgtgtcggtcgattcggtggtgagcgaggat
cgcctcccgctgatggacacgctcggtgccgacgacccggaactcgagaagatggaaagc
tacctcgctgtgcggcccgcactggagaagctgcccgagcgcgagcgtcgcatcgtggtg
ctccggttcttcgggtccatgactcagacgcagatcgccgaaaaggtcggaatttcgcag
atgcacgtgtcgcgaatcctggcgcgcacgctcgctcagttgcgagaggatctcggcgag
gactga
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