Rhodococcoides fascians PBTS 2: A3Q41_04683
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Entry
A3Q41_04683 CDS
T05030
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
rhs
Rhodococcoides fascians PBTS 2
Pathway
rhs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A3Q41_04683 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhs03400
]
A3Q41_04683 (recB)
Enzymes [BR:
rhs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A3Q41_04683 (recB)
DNA repair and recombination proteins [BR:
rhs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A3Q41_04683 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
PDDEXK_1
UvrD_C_2
Viral_helicase1
FliG_M
Motif
Other DBs
NCBI-ProteinID:
AMY25947
UniProt:
A0A143QTV2
LinkDB
All DBs
Position
complement(4935333..4938665)
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AA seq
1110 aa
AA seq
DB search
MTAARGFDLLGPMPTGTTVLEASAGTGKTYAIVGLAARYIAEGLAEISDLLLVTFSRAAT
QELRDRTRSRFASIARDLGDPDAARGARDPLVAFLAAADDDEVDERRRRLRKALSDFDAG
TIVTTHSFCQRMLDGLGIAGEREPESTFVESVSDLLDQVVDDLYLQMFSGDDEAPPFGRR
DAQQLAAAAVGDQQSILYPDIDDLDGDDGNREAALRVQFAREARREVERRKRLLGIRDYN
DLLGLLHSVLSDPVHGEAACARVRDRFRVVLIDEFQDTDPMQWDILRRAFHGYTTLILVG
DPKQAIYAFRGAEVLSYLDAVQSADHLYELTANWRSDSGLLDALDHLYGGAALGHDDIVV
HRVEARNPFSRMAGHPPLRLRYLPRTGAGPLRSGFPAVDRLRSRVAADVAAEIVTLLSGN
AVMDRPDGPRTVEPRDIAVLTRTTKQVALIRDALDAVGVPSVVSSSTSVFGTDSARHWLW
LLQAIEQPHRTDRVRLAALTPLLGWTAAQLDSGAENALSQVSSRLREYSVLFDEAGFAAV
FERVSAQSGLDARLLAVEAGERTMTDLRHIAQLLNRAAVSESYGITALTRWLTDRIKEPA
AGGSTDRSRRLDSDSAAVQIMTTHGSKGLEFPVVYLPYAWDTLYFSSPSTLLLHEDGHRI
RDVGGPSGAGYAARKLVNDREEAGEELRLLYVGLTRAQCQVVLWWAPGRNTATSSLHRML
FGRIPGIAQPEPSYKVLDDATTANRVQSWVGPSADLISIEAVGPTPPSDQQWVRPEEEHR
DVTAARFGRALDLLWRRTSYSALTAHAHDASPVEPEVGVTSEAERPEKADEPVEPPLGSA
NPDEPVDGIASPMNGMPAGAAFGTLVHEALEHVDTSAADLLSELEQRCRAAVASRMADVD
PTALAAALLPVMQTPLGFGTLADIAPNDHLAELDFELPLAGGDDPVDSSVTLTSVAQLLR
RHLDPADVLADYADLLDAVEATPLRGFLTGSIDSVLRVPGPRYIVVDYKTNRLARGDLTT
GNFTREKMAQEMMRSHYPLQAILYAVALHRYLRWRQPNYRPETHLGGVRYLFVRGMVGPQ
TPAGCGVFDWDPPAALVVELSDLLAGKVQR
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgcacgcggattcgacctcctcggtccgatgccgaccgggacgaccgtgctc
gaggccagcgccggaacgggcaagacgtacgcgatcgtcggacttgcggcgcggtacatc
gccgaaggactggccgagatctcggatctactgctggtgacgttcagtcgggccgcgacc
caggaactgcgcgatcgcacccgcagccggttcgcgtcgatcgcccgagacctcggtgat
ccggacgctgcgcgtggtgcgcgcgaccctctcgtcgcctttctcgccgcggcagacgac
gacgaagtggacgagcggcgccggcgactgcgtaaagcgctgtcggacttcgatgccggg
acgatcgtcaccacgcacagcttctgtcaacgcatgctcgacgggctgggtatcgcgggt
gagcgcgaacccgaatccacgttcgtcgagtcggtgtcggatctgctcgatcaggtggtc
gacgatctgtatctgcagatgttcagcggcgacgacgaggcaccaccgttcgggcgacgc
gacgcccaacaactggccgcggctgccgtcggagatcaacagtcgatcctgtaccccgac
atcgacgacctcgacggtgacgacggcaaccgggaagccgccctgcgggtgcagttcgct
cgggaggcccgccgtgaggtcgagcgtcgcaaacgtcttctcggcatccgcgactacaac
gatctactcggactgctgcactcggtgttgtccgatcccgtgcacggggaggcagcatgc
gcgcgcgtgcgagaccggttccgtgtcgtgttgatcgacgaattccaggacaccgacccc
atgcagtgggacatcctgcgccgggcctttcacggctacacgacattgatcctcgtcgga
gatccgaagcaggccatctacgctttccgcggtgccgaagtgctgagttatctggatgcg
gtgcagtcggccgatcatctgtacgagctgacggctaattggcgtagcgactccgggctc
ctcgacgcgttggaccatctctacggaggtgccgccctcggacacgacgatatcgtcgtc
catcgcgtcgaagcgcggaacccgttctcgcgcatggcaggacatcctccgctgcgtctg
cgctatctgccgcgcaccggagcaggaccgttacgttcgggattcccggcggtggatcga
cttcgctctcgggtggctgcggatgtggcggccgagatcgtgacgctcctgtcagggaac
gccgtcatggaccggccggacgggccgaggacggtcgaaccgcgggacattgcggtgttg
actcgcacgaccaaacaggttgcgctgattcgagatgcactcgacgcagtgggtgtgccg
tcggtggtgtcgagcagcaccagcgtcttcggcaccgacagtgctcgacactggttgtgg
ctactgcaagcgatcgaacaaccgcaccgcaccgaccgcgtcagactcgcagccctgaca
cctttgctcggttggactgccgcccaactcgattccggagccgagaacgctctgtcgcag
gtgagcagccggctgcgtgagtactccgtgctgttcgacgaggcgggtttcgccgcagtg
ttcgagcgggtgtcggcgcagtcgggtctcgatgctcggttgctcgcggtcgaggcgggg
gagcgcacgatgaccgacctgcggcacatcgcccaactgctcaatcgcgcagcggtatcc
gaatcgtacggaatcaccgctctcactcggtggctcaccgatcgaatcaaggaaccggca
gccggcggttccaccgatcgcagtcgccggctcgacagtgactcggcggcagtgcagatc
atgacgacgcacgggagcaaggggctggaatttcccgtcgtctaccttccgtacgcctgg
gacacgctctacttcagctcaccgtcgaccctgctgctgcacgaggacggccaccgcatc
cgggacgtcggcggtccctccggggccggctacgcagcacgaaagcttgtcaacgatcgt
gaagaagccggagaagaactacggctgctgtacgtgggactcaccagagcccagtgccag
gtggtgttgtggtgggcaccgggacgcaacactgctacgtcgtcgttgcaccgcatgctg
ttcggccgcattccggggattgcgcagccggagccgtcgtacaaggtgctcgacgacgcc
actaccgccaaccgcgtgcaatcctgggtcggtccgtcagcggatctgatctcgatcgag
gcagtcggccccacaccaccctcggatcagcagtgggttcgacccgaggaggaacaccgc
gacgtcactgccgctcgcttcgggcgtgctctggatttgctgtggcgtcgaacgtcctac
tccgccttgacggctcacgcgcacgatgcgtcgcccgtcgagccggaggtgggggtgacc
agtgaggccgagcggcccgagaaagcggatgagcctgtcgaacctccgctgggaagcgcg
aacccggacgagcccgtggacgggatcgcgtcaccgatgaacggcatgccggccggtgcc
gcattcggaaccctggtgcacgaggccctcgaacacgtcgatacctccgcagccgatcta
ctgtccgaactcgagcagcgctgcagagctgccgttgcctcacggatggcagatgtcgat
ccgacggctctggcagccgctctgttgccggtgatgcagacaccgctgggcttcgggacg
ctggccgacatcgcgccgaacgaccacctggccgagttggatttcgagctgcccttggcc
ggaggcgacgacccggtggactcgagcgtgactctgacatcggttgcgcagctgctgcgt
cgacatctcgacccggcggatgtcctcgcggactacgccgacctgctcgatgcagtggaa
gccaccccactgcgcggctttctcaccggaagtatcgactccgttcttcgggtacccggc
cctcgctacatcgtggtcgactacaagaccaaccgcctggcccgaggcgatctgacgacc
ggcaatttcacgcgcgagaagatggcgcaggagatgatgcggtcgcactatccgctgcag
gccattctgtatgccgttgcgttgcacaggtatttgcgatggcgtcaaccgaactaccgg
ccggagacgcatctcggcggagtacggtacctgttcgttcggggcatggtggggccgcag
actccggccggctgcggtgtgttcgactgggatccgcctgcggcactggtggtcgagttg
tcggatctgctcgccggaaaggtgcaacgatga
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