Rhodococcus sp. SGAir0479: E7742_01000
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Entry
E7742_01000 CDS
T11403
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rhsq Rhodococcus sp. SGAir0479
Brite
KEGG Orthology (KO) [BR:
rhsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhsq03400
]
E7742_01000
Enzymes [BR:
rhsq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
E7742_01000
DNA repair and recombination proteins [BR:
rhsq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
E7742_01000
Prokaryotic type
E7742_01000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QCQ89923
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All DBs
Position
213330..214664
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AA seq
444 aa
AA seq
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MASESVVWFRRDLRVGDLPALSAAGDRALGLFVLDDRLLGPSGGPRRDFLYRSLSALDEQ
LEGRLLVVRGDPVDVVPRVARAVDAQEVHVSADFGPYGRERDAAVAEHVDLVATGSPYAV
APGRVTKDDGSPYKVFTPWFKRWLDHGWRGPARTGADTLAWIDPDDVDGRGRRVRIPTPD
RPGPAAGEAAALARWREFREDDLAGYDDERDRPDLDTTSRMSVYLKFGNIHPRTMLADLA
RTRGRGAEQYRRQVAWRDFYADILFQRPDSARRNYDRKFDAIRHDSGREADELFEAWCAG
RTGYPIVDAGMRQLAAEGWMHNRVRMIVASFLVKDLHLPWWRGARHFMQCLVDGDLASNQ
HGWQWTAGSGTDASPFFRVFNPTGQGEKFDPTGDYVRRWVPELRGVPGKAVHALKNDRPD
GYPEPVVDHAEERREALARYGELP
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
gtggcctctgagtcggtggtgtggtttcgacgtgatctgcgggtcggtgacctgccggcg
ctgagtgccgccggcgaccgggcgctggggctgttcgtgctcgacgaccgactgctcggg
ccgtcgggtgggccgcggcgggacttcctgtaccgcagcctgtccgcgctcgacgaacaa
ctcgagggccggttgctggtcgtgcgcggcgacccggtggacgtggtgccgcgggtggcg
agagcggtcgatgcgcaggaggtgcacgtgagcgccgacttcggtccgtacgggcgggaa
cgggatgcggcggtggccgagcacgtcgacctggtggccaccggttcgccgtacgccgtg
gcgcccggccgggtgacgaaggacgacggcagcccctacaaggtgttcacgccgtggttc
aagcggtggctcgaccacggctggcgcggaccggcacgcaccggcgcggacacgctcgcg
tggatcgatccggacgacgtcgacgggcggggccggcgggtgcggatcccgacgcccgac
cggcccggcccggcggcgggggaggcggctgcactcgcgcgctggcgggagttccgggag
gacgacctcgccggctacgacgacgagcgtgaccggccggatctcgacaccaccagccgg
atgtcggtgtatctcaagttcggcaacatccaccctcggacgatgctcgcggacctcgcc
cgcacacgcggccgcggcgccgagcagtaccgacggcaggtggcgtggcgagacttctac
gccgacatcctgttccagcgcccggacagtgcccgccgcaactacgaccgcaagttcgac
gcgatccgccacgacagcggccgcgaggccgacgagctgttcgaggcatggtgcgcgggc
cgcaccgggtatccgatcgtcgatgccggcatgcgccagttggcagccgaagggtggatg
cacaaccgcgtccggatgatcgtcgcgtcgtttctcgtcaaggatctgcacctgccgtgg
tggcgtggggcgcgccatttcatgcagtgcctggtcgacggcgatctggcgtcgaaccag
cacggctggcagtggacggccggctcggggacggatgcgtctccgttcttccgggtgttc
aacccgaccggtcagggcgagaagttcgaccccacgggcgactacgtgcgccggtgggtg
ccggaattgcgtggcgtgcccggcaaggccgtccatgcgctgaagaacgaccgccccgac
ggctatccggaaccggtggtcgatcacgccgaagagcgccgggaagctctcgcccggtac
ggcgagctgccctga
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