Rhodococcus sp. SGAir0479: E7742_02120
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Entry
E7742_02120 CDS
T11403
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
rhsq Rhodococcus sp. SGAir0479
Brite
KEGG Orthology (KO) [BR:
rhsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
rhsq03012
]
E7742_02120 (selB)
Translation factors [BR:
rhsq03012
]
Eukaryotic type
Elongation factors
E7742_02120 (selB)
Prokaryotic type
E7742_02120 (selB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
Beta-barrel_SelB
WHD_3rd_SelB
MMR_HSR1
GTP_EFTU_D2
WHD_2nd_SelB
eIF2_C
FeoB_N
Motif
Other DBs
NCBI-ProteinID:
QCQ90123
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All DBs
Position
439649..441403
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AA seq
584 aa
AA seq
DB search
MMFVVATAGHVDHGKSTLIRALTGEEPDRWAEERRRGLTIDLGFASTTLPNGRTVAFVDV
PGHRRFVPNMLAGVGPVPAVMFVVAADDGWMPQSQEHLDALAALGVRHGVLVITRSDLLD
PEPAAEEARAALAGTSLAHIPTVAVSAVTGSGMDELRSALERLGNELPPADVDADVRLWV
DRSFTIGGAGTVVTGTLGAGTVRTGDTLRVGVNGPRVVVRGLQSLGRDRAEVPAPARVAV
NLRGVANSDIARGDALLTPDRWYQTATVDVRLTAPGTLREHVVVHCGSAAVGARVRPLTD
AFARLSLEQPLPLRIGDRLILRDPDAGLIPSGAVVLDPAPPELRRRGDARRRAEVLAAAT
PDVGSELHRRGFARARDLRAWGVTGVPDTAGPGDWLLDPDTARSAAERLGKLVDEHARTH
PLAPGLPGEAARRALALPDPQLLAAVLEHAGALTVDDGRIVRRDAEAGLPEPVAQAAARL
QQRWEDEPFVAPSAGDLAELGLGHRELAACARAGLVTPLGGGVWLGSGAVDAAVEALREL
PEPFTPSEARTRLGTSRRVIMPLLELLAREGRTRRAGEDGHVVA
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
gtgatgttcgtcgtcgcgaccgccgggcacgtcgatcacggcaaatccacgctgatccgt
gcgctcaccggcgaggaaccggaccgctgggccgaggaacgccgccgtggtctcacgatc
gatctgggtttcgcgtccacgacgctcccgaacggccggaccgtcgccttcgtcgacgtg
ccggggcaccgacggttcgtgccgaacatgctggcgggcgtcgggccggtgcccgcggtg
atgttcgtggtcgcggccgacgacggctggatgccgcagtcccaggagcacctggacgcg
ctcgccgcgttgggcgtccggcacggggtgctcgtgatcacccgcagcgacctgctcgac
cccgagccggcggccgaggaagcgcgggcggcgctggccggaacgtcgctcgcgcacatc
ccgacggtcgcggtctccgccgtcaccggctccgggatggacgaattgcgttcggcgctg
gaacgactcgggaacgagctccccccggcggacgtcgacgcggacgtacggctgtgggtc
gaccgctcgttcaccatcggcggggcgggcaccgtggtgaccggcaccctgggcgccggc
accgtgcggaccggcgacacgctgcgcgtgggcgtgaacgggccgcgcgtggtggtgcgg
ggcctgcagtcgctcggtcgggaccgcgcggaggtgccggcgccggcccgagtggcggtg
aacctgcgcggcgtcgccaactccgacatcgcacgcggcgatgcgctgctcacccccgac
cggtggtaccagaccgccacggtggacgtgcggctgacggcacccggaacgctgcgggaa
cacgtcgtcgtgcactgcgggtccgctgcggtcggcgcccgcgtccgaccgctcaccgac
gcgttcgcccggttgtcgctcgagcagccgctgccgctgcggatcggcgaccggctgatc
ctgcgcgatccggacgccgggctcatcccgtcgggtgcggtggtcctcgatcccgctccg
cccgaacttcgccggcgcggcgatgcccgtcggcgcgccgaggtcctggccgcggcgacc
cccgacgtcggctcggagttgcaccgacgcggttttgcgcgggcccgcgatctgcgggcg
tggggtgtgaccggtgttcccgacacggcgggccccggcgactggctgctcgaccccgac
acggcacgctcggcggcggagagactggggaagctggtcgacgagcacgctcgcacgcat
ccgctcgcgcccggactgcccggcgaggcggcgcgccgagcgctcgcgctgcccgacccg
cagctgctggccgcggtgctcgagcacgccggcgccctcacggtggacgacggccggatc
gtgcgacgcgacgccgaggccgggcttccggagcccgtcgcgcaggcggccgcccgactg
cagcagcggtgggaggacgagcccttcgtcgcccccagcgcgggcgacctcgccgaactg
gggctcgggcaccgcgaactcgcggcgtgtgcgcgggcaggactggtcactcccctcggc
gggggtgtctggctcgggtccggagcggtggacgccgccgtcgaggcgctccgggagcta
ccggaacctttcacgcccagcgaagcccggactcgtctgggaacctcgcgtcgggtgatc
atgccgctgctcgagctcctcgcccgcgaggggcgtacccgccgggcgggcgaggacggt
cacgtcgtggcgtga
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