Rhodococcus sp. SGAir0479: E7742_04000
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Entry
E7742_04000 CDS
T11403
Name
(GenBank) AAA family ATPase
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
rhsq Rhodococcus sp. SGAir0479
Pathway
rhsq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhsq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E7742_04000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhsq03400
]
E7742_04000
Enzymes [BR:
rhsq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
E7742_04000
DNA repair and recombination proteins [BR:
rhsq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E7742_04000
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QCQ90468
LinkDB
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Position
840305..843700
Genome browser
AA seq
1131 aa
AA seq
DB search
MGAAARGRDPGGTVTQTASRDTDTATATDTATATTTDTAFDLFAPLPQGTTVLEASAGTG
KTYAIVGLAARFVAEEDIDLSQLLLVTFSRAATKELRERTRERFASAAAGLADPAAARDS
DDPLVAHLAATDDAEIALRRRRLMQALSDFDAGTIVTTHSFCQRMLDGLGIAGERDPDAV
LVEEAEDLVAEVIADLFLHRFARADSRTLRPADARAAARAAIFDPQSVLAPEDAEGTRAG
DAVAFATAVRQETQRRKRLAGIRDFDDLPALLHAVLTDPEHGEAACRRVRDRYRVVLVDE
FQDTDPQQWGILRAAFHGHSTLVLVGDPKQAIYAFRGAEVLSYLDAVGSAHSHQELTTNW
RSDADLVAALGHLHGGAALGHRDIVVHPVSAAKPGSRLQGAAPLRLRYLCRAGAGRLNNS
GFPAVGALRTRVAADVAADIVALLGSGATLELDGVTRPVAPGDIAILAGTNAQIALVREA
LDRVGVPSVLAGGTSVFETPAATHWLQLLQALEQPHRPDRVRLAALTPLIGWTAADIDAR
SDEVVARVGGQLRELATVFAQSGFAALFERLAAESGLEARLLTVASGERTLTDLRHIGQL
LGAVAVDESLGLTALTGWLTDRIKDPKSGSGDRSRRLDSDAAAVQIATVHASKGLEYPIV
YVPFGWSTGRYADPNRLLLHDEHGRRILDIGGEGSPGYGDRRRRRDAEAAGEDLRLLYVA
LTRAQCQLVLWWAPAYSTNEAPLHRMLFGREPGESDVPQKVGVPEDPMVAEQLTRWAEAA
PVTVEVHAVGADPIPKPSWTPPQEETGELAAAVFRRELDAGWRRTSYTALTASAHEHPGV
TSEAEEPEIEDEPEEPALITPAPALGIPSTMNDMPYGAVFGTLVHEILEHVDTAAADLEA
ELVRHCREAVAARMSQVDPVALADALLPVLRTPLAGGGTLADITPRDRLPELDFELPLAG
GDDPAVLTVTLHRIVDLLRMHLPSDDVLAPYADRLATLEPTPLRGYLTGSIDAVLRREGP
RFVIVDYKTNRIAPGEVTTADFTREAMAGEMMRSHYPLQALLYAVALHRYLRWRLPGYDP
ATHLGGVQYLFVRGMVGPDTPDGAGVFDWDPPAALVVELSDLLAASAEGNA
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
gtgggggccgctgctcgcggccgagaccctgggggaaccgtgacgcagaccgcgagccgg
gacacggacacagccacagccacagacacagccaccgcgaccaccaccgacaccgcgttc
gacctgttcgcgccgctgccgcagggcaccaccgtgctcgaggccagcgccggcaccggc
aagacgtacgcgatcgtcgggctcgcggcccgcttcgtcgcggaggaggacatcgacctc
tcgcagctgctgctggtcaccttcagccgcgccgccaccaaggagctgcgcgaacgcacc
cgcgagcggttcgcctccgccgcagccggattggcggacccggccgccgcccgcgacagc
gacgatcccctggtggcgcacctggccgccaccgacgacgccgagatcgcgctgcggcgc
cgacggctgatgcaggcgttgtcggacttcgacgccggcaccatcgtcaccacccacagc
ttctgccagcggatgctcgacggcctcggcatcgccggcgagcgcgacccggacgcggtg
ctggtcgaggaggccgaggacctggtcgccgaggtgatcgccgacctgttcctgcaccgc
ttcgcccgcgccgactcccgcaccctgcggcccgccgacgcgcgtgccgccgcccgggcc
gcgatcttcgacccgcagtcggtgctcgcccccgaggacgccgagggcacccgcgccggg
gacgccgtcgcgttcgccaccgccgtccgacaggagacccagcgccgcaagcggctcgcc
ggcatccgggacttcgacgacctgcccgcgctgctgcacgccgtgctcaccgatcccgag
cacggggaggcggcgtgccggcgggtgcgggaccgctaccgggtggtgctggtcgacgag
ttccaggacaccgacccgcagcagtgggggatcctgcgcgccgcgttccacgggcactcc
acgctggtgctggtcggcgaccccaagcaggccatctacgcgttccgcggcgccgaggtg
ctcagctacctcgacgccgtcgggtccgcgcacagccaccaggagctcaccaccaactgg
cgcagcgacgccgatctcgttgccgcactggggcatctgcacggcggcgccgccctcggg
caccgcgacatcgtcgtgcatccagtgtcggcggccaagccggggtcgcggctgcagggg
gcggcgccgctgcggttgcggtacctgtgccgggcgggcgccggacggctcaacaactcc
ggcttcccggccgtcggggcgctgcgcacgcgggtcgcggcggatgtggccgccgacatc
gtcgcactgctcgggagcggcgccaccctcgagctggacggggtgacgcggccggtcgcg
ccgggggacatcgcgatcctggccggcaccaacgcccagatcgcgctggtgcgggaggcg
ctggaccgggtgggcgtgccgtcggtgctggccggcggcaccagcgtcttcgagaccccg
gccgccacgcactggctgcagctgctgcaggcgctcgagcagccgcaccgccccgaccgg
gtgcggctcgcggcgctcaccccgctcatcggctggaccgccgccgacatcgacgcccgc
agcgacgaggtggtcgcccgcgtgggcgggcagctgcgggagctggcgacggtgttcgcg
cagtccgggttcgcggcgctgttcgagcggctcgccgccgagtccgggctcgaggcgcgg
ctgctgaccgtcgcgtcgggggagcgcacgctcactgacctgcggcacatcgggcagctg
ctgggcgcggtcgccgtcgacgagtccctcgggctcaccgcgctcaccggctggctcacc
gaccgcatcaaggacccgaaatccggtagcggcgaccgcagccggcgcctcgacagcgac
gcggccgcggtacagatcgcgaccgtgcacgccagcaagggcctcgagtaccccatcgtg
tacgtgccgttcgggtggagcaccggccgctacgccgaccccaaccggctgctgctgcac
gacgagcacggccgccgcatcctcgacatcggcggcgagggcagccccggctacggcgac
cgccggcgtcggcgcgacgccgaggccgccggcgaggacctgcggctgctgtacgtcgcg
ctcacccgcgcccagtgccagttggtgctgtggtgggcgcccgcgtactccaccaacgag
gcgccgctgcaccggatgctgttcgggcgcgagccgggggagtcggacgtcccgcagaag
gtgggcgtgccggaggacccgatggtcgccgagcagctcacccgctgggcggaggccgcg
ccggtgacggtggaggtgcacgccgtgggcgccgacccgattccgaagccgtcgtggacg
ccgccgcaggaggagaccggtgagctggcagccgccgtcttccgccgcgagctggacgcc
gggtggcgccgcacgtcgtacaccgcgctcaccgcgtcggcgcacgagcatcccggcgtc
accagcgaggccgaggaaccggagatcgaggacgagccggaggagcccgcgctcatcacg
cccgcgcccgccctgggcatcccgtcgaccatgaacgacatgccctacggcgcggtgttc
ggcacgctggtgcacgagatcctcgagcacgtcgacaccgctgccgcggacctcgaggcc
gagctggtgcggcactgccgcgaggccgtggccgcgcggatgtcgcaggtcgatccggtg
gcgctggccgacgcgctgctacctgtcctgcggaccccgctcgccggtggcggcaccctc
gccgacatcaccccgcgggaccggctgccggagttggacttcgagctaccgctcgccggc
ggcgacgacccggcggtgctcacggtgacgctgcaccggatcgtggacctgctgcggatg
catctgccgtccgacgacgtcctcgcgccgtacgcggatcggctcgccaccttggagccg
acgccgctgcgcggctacctcaccggcagcatcgacgccgtgctgcggcgcgagggtccc
cggttcgtcatcgtcgactacaagaccaaccgcatcgcgcccggcgaggtgaccaccgcc
gacttcacccgcgaggcgatggccggggagatgatgcgctcgcactacccgctgcaggcg
ctgctgtatgccgttgcgctgcaccggtatctgcggtggcggctgcccggctacgacccg
gcgacgcacctgggtggggtgcagtacctgttcgtgcgcggcatggtcggccccgacacc
ccggacggcgcgggggtgttcgactgggatccgcccgccgcgctggtggtggagctgtcg
gatctgctggcggcgagtgccgaggggaacgcatga
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