Rhodococcus sp. SGAir0479: E7742_04070
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Entry
E7742_04070 CDS
T11403
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
rhsq Rhodococcus sp. SGAir0479
Brite
KEGG Orthology (KO) [BR:
rhsq00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
E7742_04070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhsq03021
]
E7742_04070
Transcription machinery [BR:
rhsq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E7742_04070
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
NAGLU_N
Motif
Other DBs
NCBI-ProteinID:
QCQ90481
LinkDB
All DBs
Position
863346..864692
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AA seq
448 aa
AA seq
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MFKRFVGDDGQLILHDGYIWVTRENLSPSSGFSHPTEPRRAPLHAIELLTVFRGSRSRPA
CVHVMARGDNARLGCTHAACNGPGGVRFGGGTSAPILDALVASFTDLGIEVREARHEVMP
TRPPRPAVMLRERSSPARTSGNESAAADGLQWYLKRIRRVDLLTADEEVELSRSIEAGLY
ASHLLEAYPSRTTRPAPAERRDLRQIVQDGRSARTRMIEANLRLVVSTAQNYEGRGLDML
DLVQEGNTGLIRAVEKFDYRLGNKFSTYATWWIRQAITRGIADKSRTIRLPVHVVEDLSR
MTTVRVEGEIELGRALTDAEVAQRADLTLEKVRELDDCDRTVLSIEALTDSDDGAGLDIE
DDCAHDPYEALHRADVRERIDIVLETLTEREAGVMKLRHGLVDGVPRTLEEIGKVYKVTR
ERIRQIEAKTLQLLREPSRADELRPFDS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaagcgcttcgtcggcgacgacgggcaactgatcctgcacgacgggtacatctgg
gtgacccgcgaaaacttgtcaccgagctcggggttcagccatccgacggagcctcgacgt
gcaccgctgcatgcgatcgagctgctcacggtgttccgcggctcgcgatcgcggccggcc
tgcgtgcacgtgatggcacgtggcgacaacgcacggctggggtgcacccacgcggcctgt
aacggtccgggcggcgttcgcttcggcggaggtaccagtgcacccattctggatgcactg
gtggcatcgttcaccgacctcggtatcgaggtgagggaggcgcggcacgaggtaatgccc
actcgaccgccgcgaccggcggtgatgctgcgtgagaggtcctcccctgcacggacatcg
ggtaatgagagcgcggcagcggatggtctgcagtggtatttgaagaggatcaggcgggtc
gacctcctcaccgcggacgaggaggtcgaactcagcagaagcatcgaggccgggctgtac
gccagtcacctcctcgaggcctatccgtcgcgaactacgagaccggcgcctgcggaacgt
cgcgacttgaggcagatcgtgcaggacggacgttctgcacggacccgaatgatcgaggcg
aatctgcgcctggtcgtatcgactgcccagaactacgagggcagagggctcgacatgctc
gacctcgtccaggagggcaataccggactcatccgagccgtcgagaagttcgactaccgg
ctgggcaacaagttctccacgtatgccacgtggtggatccggcaggcaatcactcggggg
atcgcggacaagtcccgcacgatccgattgcccgtgcacgtggtcgaggacttgtcgcgt
atgacgacggttcgggtcgagggggagatcgagctcggcagggccttgaccgatgccgag
gttgcccagcgtgccgatctgactctcgagaaggttcgggagctggacgattgtgatcgg
acggttctgagcatcgaggcgctgaccgatagcgacgacggtgctggactcgacatcgag
gacgactgcgcccacgatccgtacgaggcgctccatcgcgcggatgtccgagaacgcatc
gacattgttctggaaacgctgaccgaacgcgaggccggtgtgatgaagctgcggcacgga
ctcgtcgacggtgttccgcgcacactcgaggagatcggcaaggtctacaaagtgacccgg
gagcggatccggcagatcgaggcgaagaccctccaacttctcagggaaccatcacgagcg
gacgagttgcggcccttcgacagctga
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