Rhodococcus sp. SGAir0479: E7742_09660
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Entry
E7742_09660 CDS
T11403
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rhsq Rhodococcus sp. SGAir0479
Pathway
rhsq03030
DNA replication
rhsq03430
Mismatch repair
rhsq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhsq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E7742_09660 (dnaE)
03430 Mismatch repair
E7742_09660 (dnaE)
03440 Homologous recombination
E7742_09660 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhsq03032
]
E7742_09660 (dnaE)
03400 DNA repair and recombination proteins [BR:
rhsq03400
]
E7742_09660 (dnaE)
Enzymes [BR:
rhsq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E7742_09660 (dnaE)
DNA replication proteins [BR:
rhsq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E7742_09660 (dnaE)
DNA repair and recombination proteins [BR:
rhsq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E7742_09660 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QCQ91477
LinkDB
All DBs
Position
complement(2066062..2069598)
Genome browser
AA seq
1178 aa
AA seq
DB search
MADSFVHLHNHTEYSMLDGAAKVGPLFKEAERLGMTAVGMTDHGNMYGASEFYNVAKKHG
IKPIIGIEAYVAPESRFNTKRVLWGDPSQKSDDVSGSGAYTHMTMVAENSTGLRNLFKLS
SLASIEGQLGKWPRMDEELIAHHAEGIIATTGCPSGEIQTRLRLGHDREALEAAAKWQEI
WGKDNFFLELMDHGLSIERRVREGLLEIGNKLGIPPLATNDCHYVTKDAAENHEALLCIQ
TGKTLSDPTRFKFDGDGYYLKSADEMRAIWDSEVPGACDNSVLIGERVQPYEDVWQHRDR
MPIFPVPEGETQASWLHKEVMRGLDRRFPAGPPREYIERAEYEIRVINQMGFPAYFLVVG
DLINHAREVGIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERVSMPDIDID
FDDRRRGEMVRYATDKWGSDKVAQVITFGTIKTKAAIKDSARVQFGQPGFAIADQITKAL
PPPIMAKDISVSGITDPEHERYKEAVEVRALIDSNPDVAKIYQTAKGLEGLIRNAGVHAC
AVIMSSEPLTDAIPVWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDAIENIK
ANRGIDIDLDTLPLEDPATYELLARGDTLGVFQLDGSAMRDLLRRMQPTGFEDIVAVLAL
YRPGPMGMNAHNDYADRKNGRQDVKPIHPELEEPLKEILADTFGLIVYQEQIMQIAQKVA
GYSLGQADLLRRAMGKKKKEILDEAYDGFAEGMKTNGFSQAAITALWDTVLPFAGYAFNK
SHAAGYGLVSFWTAYLKANYPSEYMAGLLTSVGDDKDKAAVYLSDCRKMGITVLPPDVNA
SRVDFASVGEDIRFGLGAVRNVGANVVSSIIAAREEKGSFTDFSDYLNKIDALACSKKVT
ESLIKAGGFDSLGHPRKGLMLVHADAIDAVMGTKKAEAMGQFDLFGGDDADESITSVFNV
KVPDEEWESKHKLALEREMLGLYVSGHPLNGVEHVLAAQSDTSIPTILEGDIKDGTQVTV
GGILASVNRRINKNGLTWASAQLEDLSGGIEVLFFPQAYSVYGMDVVEDSVVLVKARVSI
RDDRVSLIANDLAVPDLSAIGVAKPVAVSLPVRQCTKEKLGALRQVLSRHPGTADVHVKL
IGSRGTSLWKVDEVLRVEPSSSLMGDLKALLGPSCLAG
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
gtggctgactcgttcgttcacctgcacaaccacaccgagtactcgatgctcgacggtgcg
gcaaaggtcggcccgttgttcaaggaagccgaacggctcgggatgaccgcggtcgggatg
accgaccacggaaacatgtacggcgccagtgagttctacaacgtcgccaagaagcacggc
atcaagccgatcatcggcatcgaggcgtacgtcgcgcccgagtcgcggttcaacaccaag
cgcgtgctgtggggcgatcccagtcagaagtccgacgacgtctccggtagcggcgcctac
acgcacatgacgatggtcgccgagaactcgaccggtctgcggaacctgttcaagctgtcg
tcgctcgcgtcgatcgagggccagctcggcaagtggccgcgcatggacgaggagctcatc
gcccaccacgccgaggggatcatcgcgaccaccggctgcccgtcgggtgagatccagacc
cggctgcgtctcggtcacgaccgggaggcactcgaggccgccgcgaagtggcaggagatc
tggggcaaggacaacttcttcctcgagctgatggaccacgggctctcgatcgagcgacgc
gtgcgcgagggcctgctcgagatcggcaacaagctcggcatcccgccgctggcgaccaac
gactgccactacgtcaccaaggacgccgcggagaaccacgaggcactgctgtgcatccag
accggcaagacgctgtcggatcccacgcgcttcaagttcgacggcgacggctactacctc
aagtcggccgacgagatgcgcgccatctgggactccgaggttcccggcgcatgcgacaac
tccgtgctcatcggcgagcgggtgcagccgtacgaggacgtgtggcagcaccgcgaccgg
atgccgatcttcccggtgcccgagggcgagacgcaggcgagctggctgcacaaggaggtg
atgcgcggtctcgaccgccgcttcccggccgggccgccgcgcgagtacatcgagcgcgcc
gagtacgagatccgcgtcatcaaccagatgggcttccccgcgtacttcctcgtggtcggc
gacctcatcaaccacgcccgcgaggtcggcatccgggtcggtcccggtcgtggctcggcg
gccggctcgctcgtcgcgtacgcgatgggcatcaccaacatcgaccccatcccgcacgga
ctgctgttcgagcgattcctcaaccccgagcgcgtgtcgatgcccgatatcgatatcgac
ttcgacgatcgccgccgcggcgagatggtccgctacgccaccgacaagtggggcagcgac
aaggtggcgcaggtcatcacgttcggcaccatcaagaccaaggcggccatcaaggactcc
gcgcgagtccagttcgggcagcctgggttcgccatcgccgaccagatcaccaaggcgctg
ccgccgccgatcatggccaaggacatctcggtgtcgggcatcaccgaccccgagcacgag
cgctacaaggaggccgtcgaggtccgcgcgctcatcgactccaacccggacgtcgcgaag
atctaccagaccgccaagggcctcgagggcctgatccgcaacgccggcgtgcacgcgtgc
gcggtcatcatgtccagcgaaccgctcaccgacgccatcccggtgtggaagcgcgcgcag
gacggcgcgatcatcaccggctgggactacccgtcgtgtgaggccatcggcctgctcaag
atggacttcctgggtctgcgcaacctcaccgtcatcggtgacgcgatcgagaacatcaag
gccaaccgcggcatcgacatcgacctcgacaccctgccgctcgaggacccggcgacgtac
gaactgctcgcgcgcggcgacaccctcggcgtgttccagctcgacggcagcgcgatgcgc
gatctgctgcgacgcatgcagcccacgggcttcgaggacatcgtcgcggtcctggcgctg
taccgcccgggtccgatgggcatgaacgcgcacaacgactacgccgatcgcaagaacggc
cgtcaggacgtcaagccgatccaccccgagctcgaggagccgctcaaggagatcctcgcc
gacacgttcggcctgatcgtctaccaggagcagatcatgcagatcgctcagaaggtggcc
ggttactcgctgggacaggcagacctgctccggcgcgcgatgggtaagaagaagaaggag
atcctcgacgaggcctacgacggtttcgccgagggcatgaagaccaacggtttctcgcag
gcggccatcaccgcgctgtgggacacggtgctgccgttcgccggctacgcgttcaacaag
tcgcacgccgccggctacggtctggtgtcgttctggaccgcgtacctcaaggccaactac
ccgtccgagtacatggccggcctgctcacctcggtcggtgacgacaaggacaaggccgcc
gtctacctctcggactgccggaagatggggatcacggtgctgccgcccgacgtcaacgcc
tcccgcgtggacttcgcgtcggtcggtgaggacatccgcttcggtctgggcgcggtccgc
aacgtcggcgccaacgtggtgtcgtcgatcatcgcggcccgggaggagaagggcagcttc
accgacttctccgactacctcaacaagatcgacgcgctcgcttgctccaagaaggtcacc
gaatccctcatcaaggcaggcggattcgattcgctcgggcatccacgcaagggcctgatg
ctggtgcacgccgacgcgatcgacgcggtgatgggcaccaagaaggccgaggcgatgggc
cagttcgacctgttcggcggcgacgacgccgacgagtcgatcacgtccgtgttcaacgtc
aaggtccccgacgaggaatgggagtccaagcacaagctcgcgctggagcgggagatgctg
gggctgtacgtgtccggccacccgctcaacggcgtcgagcacgtgctggccgcccagtcc
gacacctcgatccccacgattctcgagggggacatcaaggacggcacccaggtgacggtc
ggcggcatcctggcgtcggtgaaccggcggatcaacaagaacggcctgacgtgggcgtcg
gcgcagctcgaggacctctcgggcggcatcgaggtgttgttcttcccgcaggcgtactcg
gtctacggcatggacgtcgtcgaggactcggtggtcctggtcaaggcgcgggtctcgatt
cgcgacgaccgggtctcgctcatcgccaacgaccttgcggtgccggacctctcggcgatc
ggtgtggcgaagccggtggcggtgagtctgccggtccggcagtgcaccaaggagaagctc
ggtgcgctccggcaggtgctctcacgtcatcccggcacggcggacgtgcacgtcaagctc
atcggctcgcgcgggacgtcgctgtggaaggtggacgaggtgctccgggtggagccgtcg
tcgtcgctgatgggtgacctcaaggcgctgctcgggcccagctgcctggccgggtga
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