Rhodococcus sp. SGAir0479: E7742_11760
Help
Entry
E7742_11760 CDS
T11403
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
rhsq Rhodococcus sp. SGAir0479
Brite
KEGG Orthology (KO) [BR:
rhsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhsq03032
]
E7742_11760
03036 Chromosome and associated proteins [BR:
rhsq03036
]
E7742_11760
03400 DNA repair and recombination proteins [BR:
rhsq03400
]
E7742_11760
DNA replication proteins [BR:
rhsq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
E7742_11760
Chromosome and associated proteins [BR:
rhsq03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
E7742_11760
DNA repair and recombination proteins [BR:
rhsq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
E7742_11760
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
HU-CCDC81_bac_2
HU-HIG
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QCQ91835
LinkDB
All DBs
Position
complement(2512522..2513274)
Genome browser
AA seq
250 aa
AA seq
DB search
MNKAELIDVLTEKLGTDRRTATEAVEHVVDTIVRAVHAGESVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKALIAGGQKLPASGPAVKRGAAEPVKKAAAKKTAA
KKTAAKKTAAKKTAAKAPAKTAAKKTTATKAPAKTAAKKTATKTVAKKTTATKAPAKTAA
KKTTATKAPAKTAAKKTTAAKKTTATKAPAKTAAKKTAAKAPAKTAAKKTTAAKKTTAAK
KAPAKRGARK
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcagagctcatcgatgttctgaccgagaagctcggcactgatcggcgcacc
gccaccgaggccgtcgagcacgtcgtcgacaccatcgtgcgtgccgttcacgccggagag
agcgtcaccatcaccggtttcggcgtcttcgagcagcgccgccgcgccgcccgcgtcgct
cgcaacccgcgtacgggtgagaccgtcaaggtcaagccgacgtcggtgccggccttccgt
ccgggcgctcagttcaaggcgctcatcgccggtggccagaagctcccggccagcggtccg
gccgtcaagcgcggcgctgccgagcccgtgaagaaggctgccgccaagaagacggccgcc
aagaagaccgcggccaagaagactgccgcgaagaagactgcggccaaggctccggccaag
accgcggccaagaagaccacggcgaccaaggctccggccaagaccgcagcgaagaagacc
gccaccaagaccgtcgccaagaagaccacggcgaccaaggctccggccaagaccgcggcg
aagaagaccacggcgaccaaggctccggccaagaccgcggcgaagaagaccactgcggcc
aagaagaccactgcgaccaaggctcccgccaagaccgcagccaagaagactgcggccaag
gctcccgccaagaccgcagcgaagaagaccaccgccgccaagaagaccacggcggccaag
aaggctccggccaagcgcggcgcccgcaagtga
DBGET
integrated database retrieval system
