Rhodococcus sp. SGAir0479: E7742_15895
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Entry
E7742_15895 CDS
T11403
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rhsq Rhodococcus sp. SGAir0479
Pathway
rhsq00521
Streptomycin biosynthesis
rhsq00523
Polyketide sugar unit biosynthesis
rhsq00525
Acarbose and validamycin biosynthesis
rhsq00541
Biosynthesis of various nucleotide sugars
rhsq01100
Metabolic pathways
rhsq01110
Biosynthesis of secondary metabolites
rhsq01250
Biosynthesis of nucleotide sugars
Module
rhsq_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rhsq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
E7742_15895 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
E7742_15895 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
E7742_15895 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
E7742_15895 (rfbB)
00525 Acarbose and validamycin biosynthesis
E7742_15895 (rfbB)
Enzymes [BR:
rhsq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
E7742_15895 (rfbB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_10
NmrA
adh_short
Sacchrp_dh_NADP
Rv0313_N
Motif
Other DBs
NCBI-ProteinID:
QCQ92555
LinkDB
All DBs
Position
complement(3423274..3424269)
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AA seq
331 aa
AA seq
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MRILVTGGAGFIGSNFVRAAVRERPDSRVTVLDALTYAGSRDSLRGIDDKIEFVEGDIAD
SALVDSLVSGCDAVVHFAAESHNDNSLIDPWPFVRTNIIGTYTLLQAIREHGVRYHHVST
DEVYGDLELDDPTKFTEHTAYNPSSPYSSTKAASDMLVRAWVRSYGIRATLSNCSNNYGP
YQHVEKFIPRQITNVLTGVRPKLYGAGLNVRDWIHVDDHNAAVWKILEEGQTGRTYLIGA
DGELDNLTVVRTILELMGHDPDDFDHVKDRAGHDLRYAIDASTLRDELGWSPRYNDFREG
LQATIDWYRDNRAWWEKNKDAVEMRYETQGA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
ttgcgaattttggtgaccggtggtgcgggttttatcgggtcgaactttgtgcgtgcagcg
gtgcgagagcgaccagactcccgtgttactgtgctcgacgccttaacctacgcggggtcg
cgggattcgctgcggggcattgatgacaagatcgagtttgttgagggtgatatcgccgac
agcgccctcgttgattcgttagtttccggctgtgacgcggtggtccacttcgccgccgag
tcgcacaacgacaactcgctcatagacccctggccatttgtgcggacgaacattattggt
acgtacactttgctgcaggcgattcgtgagcatggtgttcgctatcatcacgtctctacg
gacgaggtatatggagacttggaacttgatgatcccaccaagtttaccgagcacactgct
tacaacccgtcgagcccgtactcctctacgaaggccgcgtccgacatgcttgtccgcgcg
tgggtccgttcctacggaatccgcgccacgctttccaactgctcgaacaactacgggccg
taccagcatgttgaaaagttcattccccgtcagatcaccaatgtcctgacgggtgttcga
cccaagctctacggtgctgggctgaacgtgcgggactggatccacgtggatgaccacaac
gctgccgtgtggaagattctcgaggaggggcagactgggcggacctacctcatcggcgcc
gacggtgaactcgacaatctgaccgtggtccgcaccatcctcgagctgatgggtcatgat
cccgacgatttcgaccacgtcaaggatcgtgcaggacacgatctccggtacgccatcgat
gcgtccacgctccgcgatgagctcggctggtcaccgcgctacaacgactttcgagagggc
ctccaggcgacgatcgactggtatcgagacaatcgcgcctggtgggagaaaaacaaggat
gctgtcgaaatgcgctatgaaacacagggggcgtga
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