Pseudorhizobium banfieldiae: NT26_2115
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Entry
NT26_2115 CDS
T04765
Symbol
pcrA
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rht
Pseudorhizobium banfieldiae
Pathway
rht03420
Nucleotide excision repair
rht03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NT26_2115 (pcrA)
03430 Mismatch repair
NT26_2115 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rht03400
]
NT26_2115 (pcrA)
Enzymes [BR:
rht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NT26_2115 (pcrA)
DNA repair and recombination proteins [BR:
rht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NT26_2115 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NT26_2115 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
DUF3553
DUF3638
Motif
Other DBs
NCBI-ProteinID:
CCF19839
UniProt:
L0NG32
LinkDB
All DBs
Position
2053304..2055802
Genome browser
AA seq
832 aa
AA seq
DB search
MSNVFDDIPFFDEEPEPRRPSQPAPPPAAAGQGSGLGIAARAMAARDQNRAMPDYLSGLN
PEQREAVETLAGPVLVLAGAGTGKTRVLTTRIAHILATGKAFPSQILAVTFTNKAAREMK
ERIGVLVGGAVEGMPWLGTFHSIGVKLLRRHAELAGLRSDFTILDTDDVIRLIKQLIQAE
GLDDKRWPARQFAGMIDNWKNKGLTPKDIPEGDARAFANGKGRELYRAYQDRLKTLNACD
FGDLLLHPIAIFRDHPDILKEYHGKFRYILVDEYQDTNTAQYMWLRLLAQRPKGVPQNVC
CVGDDDQSIYGWRGAEVDNILRFEKDFLGARVIKLERNYRSTEHILGAAGHLIAHNEGRL
GKTLFTDRSDPDDEKVQVHAAWDSEEEARAVGEEIERLQRGDADGKRHALNDMAILVRAS
FQMREFEDRFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLTCQPADDLAFERIVNTPKRG
LGDTTVRTLHDYARARDIPMLAAASEIIETDELKPKARKALFDVIQSFRNWQERLEKIPH
IELAEQILEESGYTDMWKNDKSAEAPGRLENLKELIRSMEQFESMRGFLEHVSLVMDAEQ
NEDLDAVSIMTLHSAKGLEFDTVFLPGWEEGLFPHQRALDEGGRSGLEEERRLAYVGITR
AKRRCHIWFVSNRRIHGLWQSTMPSRFLDELPAHHVDVAASDSNYGGYGGRGGYGQSRFD
KADPFANTYSTPGWKRAQANQTNATRDNWGTRSGHAVERIGYGESGPRTRTIEGELVAKS
VADTPSQFTVGDRVFHIKFGNGNIASIEGNKLTIDFDKAGQKRVLEGFVERV
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgttttcgacgacattccgttcttcgacgaggaaccggaaccccgccgtcct
tcgcaaccggcgccaccaccggccgccgcgggacagggatccgggctcggcattgccgcc
cgcgccatggccgcgcgcgaccagaaccgtgcaatgcccgactatctctccggcctcaat
cccgagcagcgagaagccgttgagacgctggccggcccggtgctggtgctggccggcgct
ggcacgggcaagacgcgcgtgctgacgacccgcatcgcccacatccttgcgacgggcaag
gctttcccgtcgcagatcctcgccgtcaccttcaccaacaaggcggcgcgcgagatgaag
gagcgcatcggcgtgctcgtcggtggcgcggttgaaggcatgccctggctcggcaccttc
cactcgatcggcgtgaagctcctgcgccgccatgcggagctcgcggggctgcgttccgac
ttcaccattctcgacaccgacgacgtgatccggctgatcaagcagctgatccaggcggag
gggctggacgacaagcgctggccggcccgccagttcgccggcatgatcgacaactggaag
aacaagggcctgacgccgaaggacatacccgagggcgacgcgcgcgccttcgccaacggc
aagggccgcgagctctaccgcgcctaccaggaccggctgaagacgctgaacgcctgcgac
ttcggcgacctgctgctccatccgatcgcgatcttccgcgaccacccggatatcctcaag
gagtatcacggcaaattccgctacatcctggtggacgagtaccaggacaccaacactgcc
cagtacatgtggctgcggctgctcgcccagcggccgaagggcgtgccgcagaacgtctgc
tgcgtcggcgacgacgaccagtcgatctatggctggcgcggtgcggaggtcgacaacatc
ctgcgcttcgagaaggattttctgggcgccagggtgatcaagctggagcgcaattaccgc
tccaccgaacacattctcggcgccgccggccacctgatcgcccacaatgagggtcggctc
ggcaagacgctgttcaccgaccgcagcgacccggacgacgagaaggtgcaggtacacgca
gcctgggattccgaagaggaagcccgcgccgtgggcgaggagatcgagaggctgcagcgc
ggcgatgccgacggaaaacggcatgcgctgaacgacatggcgatcctcgtgcgcgcttcc
ttccagatgcgcgagttcgaagaccgcttcgtcaccctcggcctcaactaccgcgtcatc
ggcggcccgcgcttctacgagcggctcgagatccgcgacgcgatggcctatttccgcctt
acctgccagccggccgacgaccttgccttcgagcggatcgtcaatacgccgaagcgcggg
ctgggcgacacgacggtgcgcacgctccacgactatgcccgtgcccgcgacatcccgatg
ctggctgccgcgagcgaaatcatcgagacggacgagctgaaaccgaaggcgcgcaaggcg
ctcttcgacgtgattcaaagcttcaggaactggcaggaacggcttgagaagattccgcat
atcgagcttgccgagcagatcctcgaagagtccggctataccgacatgtggaagaacgac
aagtcggctgaagcgcctggacggctggaaaacctcaaggaactgatccgctccatggag
caattcgagtccatgcggggcttcctcgagcatgtctcgctggtcatggatgccgagcag
aacgaggatctcgacgccgtctcgatcatgacgctgcactccgccaaggggctggaattc
gacaccgtcttcctgcccggctgggaggaaggtctctttccgcaccagcgggcgctcgac
gagggcggccgctctgggctggaggaggaacgccgcctcgcctatgtcggcatcacccgc
gccaagcggcgctgccacatctggttcgtctccaaccggcgcatccacgggctgtggcag
tccaccatgccctcgcgcttcctcgacgaactgccggcgcatcacgtcgatgtcgcggcg
tcggacagcaactatggcggctatggcgggcgcggcggctatggccagtcgcgcttcgac
aaggccgaccccttcgccaacacctattccactcccggctggaagcgtgcccaggccaac
cagacgaacgccacccgcgacaactggggtacccgctccggccacgcggtggaacgcatc
ggctacggcgaaagcggcccgcgcacccgtaccatcgagggcgaactggtggcgaaatcc
gtcgccgacacgccctcgcaattcaccgtcggcgaccgcgtcttccacatcaagttcggc
aacggcaacatcgcttcgatcgaaggcaacaagctgaccatcgacttcgacaaggccggc
cagaagcgggtgctggaagggtttgtggagcgggtgtga
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