Pseudorhizobium banfieldiae: NT26_2290
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Entry
NT26_2290 CDS
T04765
Name
(GenBank) conserved protein of unknown function
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rht
Pseudorhizobium banfieldiae
Pathway
rht03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NT26_2290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rht03400
]
NT26_2290
Enzymes [BR:
rht01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NT26_2290
DNA repair and recombination proteins [BR:
rht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NT26_2290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
CCF20014
UniProt:
L0NGK2
LinkDB
All DBs
Position
complement(2243400..2244860)
Genome browser
AA seq
486 aa
AA seq
DB search
MYTVTLEGRGDLGEWREAARPLLQAGVDPDKVVWQTPDATGGLFADEPQNVLPPSVQGKA
ISVPPDFLKLAGAVVCHSDPRRFALLYRLLARLARDRYTLAMAADVDVVEARQMAKSVGR
DYHKMTAFVRFKELPLPPGTAGRRRFVAWFEPDHFIVERVAPFFQRRFNDMDWLIATPKG
SASWDGETLRTTTEPAEKPHLKDETDDLWRTYYASIFNPARLKVKAMTAEMPKKYWKNLP
EAELIPGLIANAERNVLEMAAKAASEPLPFHHRLQAAAESVPPVATAPAGTLEAVRQEAR
HCTRCPLHCMATQTVFGQGPEQAKVMVVGEQPGDQEDLAGRPFVGPAGKVFNDVLQEVGL
DRRFLYVTNAVKHFKYEARGKRRIHQKPNQGEIQQCRWWLKQELDLVQPKLIVAMGATAY
FALTDEKQKLADVRGKPLTMEDGQILFVTVHPSYLLRIPDPDLKAKEMIRFRQDMESVQT
LAAGFA
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtataccgtcacgctggagggcaggggcgatcttggcgagtggcgagaggctgcgcgc
ccgcttctccaggccggtgtggacccggataaggttgtctggcagacgccggacgcgacg
ggcggcctctttgccgacgagccgcagaatgtgctgccgccgagcgtgcagggcaaagct
atttcggtgccgcccgatttccttaaactagcgggcgcggtcgtctgccacagtgatccg
cgacgtttcgcgctgctctacaggctcctcgcccggttggcgcgcgaccgatacacactg
gcaatggcggccgatgtcgatgtggtggaagcacggcagatggcgaagtccgtcgggcgt
gactatcacaagatgacggcctttgtgcgtttcaaggaattgccgctgccaccgggaacc
gccggacggcggcgcttcgtcgcctggttcgagccggatcatttcatcgtcgagcgggtc
gcacccttcttccaacgccggttcaacgacatggactggctgatcgcgacgcccaaggga
tcggcgtcctgggatggcgagacattgcgcacgacgaccgagcctgcggagaagccgcat
ctcaaggacgagacggatgatctgtggcggacctattatgcatccatcttcaatcctgct
cgattgaaggtgaaggcgatgacggcggagatgccgaagaaatactggaagaacctgcct
gaggcggagcttattccgggtcttatcgccaatgccgagcgcaatgtgctggagatggcg
gcaaaggctgcaagtgagcccctgccgtttcaccatcggcttcaggctgccgcggaaagc
gtgccgccggttgcaacggctcctgcgggaacactggaggcggtcaggcaagaggcgcga
cactgcacccgttgcccgctccactgcatggcaacgcagaccgtattcgggcaggggccg
gagcaggcgaaggtgatggtcgttggggagcagccaggcgaccaggaggatcttgccggc
aggccgttcgtcgggccggcggggaaggtgttcaatgacgtcctgcaggaggtgggcctt
gatcggcgttttctgtacgtcaccaacgcggtgaagcacttcaagtacgaggcgcgtggc
aagcgacgcatccaccagaagccgaaccaaggcgagatccagcaatgccgctggtggctg
aagcaggagcttgatctcgtgcagccgaaactgatcgtcgccatgggagcgacggcctat
tttgcactgacggacgagaagcagaagctcgcggatgtccgaggcaagccgctgaccatg
gaggatggacagatcctcttcgtgaccgtccacccgtcctatctgctgcgcattccggat
ccagacttgaaggcgaaggagatgatccgcttccgtcaggatatggagtccgttcaaacg
cttgcggcaggctttgcatga
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