Pseudorhizobium banfieldiae: NT26_2564
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Entry
NT26_2564 CDS
T04765
Symbol
rpoH
Name
(GenBank) sigma H (sigma 32) factor of RNA polymerase; transcription of heat shock and stress proteins
KO
K03089
RNA polymerase sigma-32 factor
Organism
rht
Pseudorhizobium banfieldiae
Brite
KEGG Orthology (KO) [BR:
rht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rht03021
]
NT26_2564 (rpoH)
Transcription machinery [BR:
rht03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NT26_2564 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Sigma70_r3
Sigma70_r4_2
Snapin_Pallidin
GntR
Motif
Other DBs
NCBI-ProteinID:
CCF20288
UniProt:
L0NGR6
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All DBs
Position
2488698..2489600
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AA seq
300 aa
AA seq
DB search
MARNTLPSITAGEAGLNRYLDEIRKFPMLEPQQEYMLAKRYAEHGDRDAAHQLVTSHLRL
VAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKKFDPERGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKRLFFNLRRLKGRLQAIEEGDLKPEQVAEIATKLNVSEEEVVSMNRRL
SGDASLNAPIRATEGESGQWQDWLVDDQDSQEEVLIEQDELDTRRRMLAKAMGVLNERER
RIFQARRLADDPITLEELSSEFDISRERVRQIEVRAFEKVQEAVLKEALAQANALRVVDA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaatacactgccgtcgattacggccggcgaagccggtctcaatcgctatctt
gatgaaatccgcaaatttccgatgcttgagccgcagcaggagtacatgctcgccaagcgt
tacgccgaacatggggatcgcgacgccgcacatcaactggttaccagccacctccgcctc
gtggcgaagatcgccatgggctaccgcggctatggcctccccatcggcgaggtcgtctcc
gaaggcaatgtcggcctgatgcaggccgtcaagaagttcgatccggaacgcggcttccgt
ctcgccacctatgcaatgtggtggatcaaggcctcgatccaggaatacatcctgcgctca
tggtcgctcgttaagatgggcaccaccgccaaccagaagcgcctgttcttcaacttgcgc
aggctgaagggccgactgcaggcgatcgaggaaggcgacctgaagccggagcaggtagcc
gagatcgccaccaagctgaatgtctccgaggaggaagtggtttcaatgaaccgccggctc
tccggtgatgcctccctgaatgcgccgatccgcgcgacggaaggcgaatccggacagtgg
caggattggctcgtggatgaccaggacagccaggaagaagtgctgatcgaacaggacgaa
ctggatacgcgccggcgcatgctcgccaaggcgatgggcgtcctgaacgagcgcgagcgc
cgcattttccaggccaggcgtctggccgatgatccgatcacgctggaagagctctcgtcc
gaattcgacatcagccgcgagcgcgtccgccagatcgaggttcgtgccttcgagaaggtt
caggaagcagttctgaaggaagcactggcccaggccaatgcactgcgcgtcgtcgacgcc
tga
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