Pseudorhizobium banfieldiae: NT26_2924
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Entry
NT26_2924 CDS
T04765
Name
(GenBank) putative DNA topoisomerase I protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rht
Pseudorhizobium banfieldiae
Brite
KEGG Orthology (KO) [BR:
rht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rht03032
]
NT26_2924
03400 DNA repair and recombination proteins [BR:
rht03400
]
NT26_2924
Enzymes [BR:
rht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NT26_2924
DNA replication proteins [BR:
rht03032
]
Prokaryotic type
DNA Topoisomerases
NT26_2924
DNA repair and recombination proteins [BR:
rht03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NT26_2924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
CCF20648
UniProt:
L0NHS8
LinkDB
All DBs
Position
complement(2835518..2836627)
Genome browser
AA seq
369 aa
AA seq
DB search
MDAITDLPTFDEQSLKAAGLTYVSDVEPGIRRERRGKGFCYRLPDGSVLSDPEEKRRIVA
LGLPPAYENVWICMDRRGHLQATGYDARGRKQYRYHPEWQSLRSELKFDQLARFGEVLPR
IRRRIERDLALGLDTPEAVLAAIIALMDTAHLRVGNQAYAKENRTYGATTLLKRHMTLTE
EAVVLRFTAKGGKRVSHTIKHPRLQRIFEEIADLPGRQLFSWPDDGGTAHPVDSGRLNAY
LADVAGFPVSAKTFRTWGGSLAGFAAVWQACKEGSQPRVKLICKAASERLHNTPAVCRSS
YIHPAVLALVDDASPVERLLKNELELPQLRGLRADERRLLAVLKSSSLQTQTGAAADPLQ
RWRAAAAEA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcacagatctccccaccttcgatgaacagtccctcaaggctgcaggtctc
acctatgtgagcgacgtcgaacccggaatacgccgtgaaaggaggggcaagggtttctgc
tatcgtttacccgatgggagcgtcctgagtgacccggaggagaagcgccggattgtggct
cttggactgcccccggcctatgaaaatgtctggatatgcatggatcgccgaggacacctg
caggcgaccgggtatgatgcccgcgggcgcaagcagtatcggtatcatccggaatggcag
agtcttcggagcgagctgaagttcgatcaacttgcccgttttggggaggtgctgccgcga
atccggcggcggatcgagcgggatctggctttaggactggacacccccgaggcggtcctc
gccgcgatcatcgcgttgatggataccgcgcatctgcgcgtcggcaatcaagcttatgca
aaggaaaacaggacctacggggcgacgaccctgttgaagcgacacatgacgttgacggaa
gaggccgtggtccttcgcttcacggcaaagggaggaaaacgggtcagtcacacgatcaag
cacccacggctccagcggatattcgaggagatagccgatctgccagggcgtcaactcttt
tcctggcccgatgatggtggtaccgcccatcccgtcgattccggccggctcaatgcctat
ctcgccgacgtcgcgggttttccggtctcggcgaaaacgtttaggacctggggtgggagc
cttgccggctttgccgccgtctggcaggcctgcaaggaaggctctcagccccgtgtgaag
ctgatctgcaaggccgcatccgagcggctccacaatacccccgccgtctgccgctccagc
tatatccatccggccgtgctggccctcgtggatgacgcatcgccggtggaacggctgctc
aagaacgagcttgagcttccgcagctgcgtggcttgcgcgccgatgagcggcgtctgctg
gcagtactgaagagctcaagccttcagacgcaaacgggtgcggctgcggaccccctccag
cggtggagggccgcagccgcagaggcatga
DBGET
integrated database retrieval system
