Pseudorhizobium banfieldiae: NT26_3406
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Entry
NT26_3406 CDS
T04765
Name
(GenBank) HhH-GPD family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rht
Pseudorhizobium banfieldiae
Pathway
rht03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NT26_3406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rht03400
]
NT26_3406
Enzymes [BR:
rht01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NT26_3406
DNA repair and recombination proteins [BR:
rht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NT26_3406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
CCF21128
UniProt:
L0NJ71
LinkDB
All DBs
Position
complement(3328297..3328941)
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AA seq
214 aa
AA seq
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MCIIRNESDIQVGLAALASLDPRLVPVIEAAGPVPLRLVEAGFAGLAFIIVSQVVSKASA
AAIWNRIRAAGPTTAETYLGHQPATIASFGLSRAKAATLAHVARAVANGEVDLEEVARME
PAAAMAKLTALYGVGPWTAEVYLMFCGGHPDIFPSGDVALQAAAAHAFGLPGRPSARSLA
GMAEVWQPWRSVAARLLWAYYSASIRKDVAPVAG
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtgcatcatccgcaacgaaagcgacatccaggtcggccttgcggcgctggcgtcactc
gacccgcggctggtgccggtgatcgaggctgccggtcccgtgccgctgaggttggtggag
gcaggctttgccgggctagccttcatcatcgtctcgcaggtggtctcgaaagcgagcgcc
gcggcgatctggaaccgcatccgcgcggcgggaccaaccacggccgaaacctatcttggc
catcagccggcaacgattgcgtccttcggcttgtcgcgcgccaaggcagccacgctcgca
catgttgcccgagctgtggccaatggtgaggtagacctggaagaagtcgcgcggatggag
cccgccgctgcgatggcgaagctgacggcgctttacggggtggggccatggacggccgaa
gtctatctgatgttctgcggcggccatccagatatatttccgtcaggcgatgtcgccttg
caggctgctgccgcccatgctttcggcctgccgggaaggccatccgcccggtcgctcgcg
gggatggcggaggtttggcagccatggcgttcggtcgcggcccgacttctatgggcctac
tattccgccagcatccgcaaagatgtggccccagttgcggggtaa
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