KEGG   Pseudorhizobium banfieldiae: NT26_3485
Entry
NT26_3485         CDS       T04765                                 
Symbol
lpd
Name
(GenBank) dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rht  Pseudorhizobium banfieldiae
Pathway
rht00010  Glycolysis / Gluconeogenesis
rht00020  Citrate cycle (TCA cycle)
rht00260  Glycine, serine and threonine metabolism
rht00280  Valine, leucine and isoleucine degradation
rht00310  Lysine degradation
rht00380  Tryptophan metabolism
rht00620  Pyruvate metabolism
rht00630  Glyoxylate and dicarboxylate metabolism
rht00640  Propanoate metabolism
rht00670  One carbon pool by folate
rht00785  Lipoic acid metabolism
rht01100  Metabolic pathways
rht01110  Biosynthesis of secondary metabolites
rht01120  Microbial metabolism in diverse environments
rht01200  Carbon metabolism
rht01210  2-Oxocarboxylic acid metabolism
rht01240  Biosynthesis of cofactors
Module
rht_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rht_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rht_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
rht_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rht_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rht00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    NT26_3485 (lpd)
   00020 Citrate cycle (TCA cycle)
    NT26_3485 (lpd)
   00620 Pyruvate metabolism
    NT26_3485 (lpd)
   00630 Glyoxylate and dicarboxylate metabolism
    NT26_3485 (lpd)
   00640 Propanoate metabolism
    NT26_3485 (lpd)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    NT26_3485 (lpd)
   00280 Valine, leucine and isoleucine degradation
    NT26_3485 (lpd)
   00310 Lysine degradation
    NT26_3485 (lpd)
   00380 Tryptophan metabolism
    NT26_3485 (lpd)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    NT26_3485 (lpd)
   00670 One carbon pool by folate
    NT26_3485 (lpd)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rht04147]
    NT26_3485 (lpd)
Enzymes [BR:rht01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     NT26_3485 (lpd)
Exosome [BR:rht04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   NT26_3485 (lpd)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored FAD_binding_2 NAD_binding_8 HI0933_like GIDA Lys_Orn_oxgnase AlaDh_PNT_C DAO Thi4 FAD_binding_3 3HCDH_N Lycopene_cycl Amino_oxidase
Other DBs
NCBI-ProteinID: CCF21207
UniProt: L0NLN5
LinkDB
Position
complement(3409108..3410514)
AA seq 468 aa
MAYDVVVIGSGPGGYVCAIKAAQLGLKVAVVEKRATYGGTCLNVGCIPSKALLHASEMFH
HAAHGMDSLGVEIPAPKLNLEKMMAHKDATVKSNVDGVAFLFKKNKIDGLIGTGKIVAAG
KVSVTAEDGSTQELETKNIVIATGSDVAGIPGVNVEVDEKVIVSSTGAIALDKVPQNLVV
VGGGVIGLELGSVWMRLGAKVTVVEYLDTILGGMDGEVSKQFQRMLAKQGMTFNLGEKVT
GVEKSGAGAKVTFEPVKGGEAQTIEADVVLISTGRKPYTAGLGLEEAGVALDNRGRVEID
GHYKTNVDGIYAIGDVVKGPMLAHKAEDEGVALAEILAGQHGHVNYDVIPGVVYTQPEVA
SVGKTEEELKAAGVAYKVGKFPFTANGRARAMQVTDGFVKILADKETDRVLGGHIVGFGA
GEMIHEIAVLMEFGGSSEDLGRTCHAHPTMSEAVKEAALATFFKPLHM
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggcttatgatgtcgtcgttatcggaagcggacccggtggttatgtctgcgccatcaag
gcggcccagctcgggctgaaggttgccgtggtcgagaagcgtgccacctatggcggcacc
tgcctcaatgtcggctgcattccctccaaggccctcctgcatgcctccgagatgttccat
catgccgcccacggcatggattcgctcggcgtcgagatcccggctcccaagctcaacctt
gaaaagatgatggcgcacaaggatgcgacggtgaagtcgaacgtcgacggggtcgctttc
ctgttcaagaagaacaagatcgacggcttgatcggaaccggcaagatcgttgcggccggc
aaggtctccgtgactgccgaggacggcagcacccaggaactggagacgaagaacatcgtc
atcgccaccggttccgacgttgccggcatccccggcgtgaatgtcgaggtcgatgagaag
gtgatcgtctcctccaccggcgcaatcgcgctcgacaaggtgccgcagaacctcgtggtc
gtcggcggtggcgtgatcgggctggagctcggctcggtctggatgcgcctcggcgccaag
gtgacggtcgtcgaatacctggacaccatcctcggcgggatggacggcgaggtctccaag
cagttccagcgcatgctggccaagcagggaatgaccttcaacctgggagaaaaggtgacc
ggggtcgaaaagtccggcgccggtgccaaggtcacgttcgagcctgtgaagggcggcgaa
gcgcagacgatcgaggcggatgtcgtgctgatctccaccggccgcaagccctatacggca
ggccttggcctcgaagaggcgggcgtggcgctcgacaatcgcggccgggtcgagattgac
gggcactacaagacgaatgtcgacggcatctatgcgatcggcgacgtcgtgaaggggccg
atgctcgcccacaaggcggaagacgaaggcgtggcgctggcggaaattctcgccggccag
cacggccatgtaaactacgatgtcattcctggcgtcgtctatacgcagccggaagtcgct
tcggtcggcaagaccgaggaagagctgaaggcggcaggagtggcttacaaggtcggaaag
ttccccttcaccgcgaacggccgtgcccgcgcgatgcaggtgacggacggcttcgtgaag
atcctcgccgacaaggagacggatcgcgtgctcggtggccacatcgtcggcttcggtgcg
ggcgaaatgatccacgagatcgccgtgctgatggagttcggtggatcgtcggaagatctt
ggccgcacctgccatgcgcatccgaccatgtcggaagcggtgaaggaggcagccctcgcc
accttcttcaagccgctccacatgtag

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