Pseudorhizobium banfieldiae: NT26_3551
Help
Entry
NT26_3551 CDS
T04765
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rht
Pseudorhizobium banfieldiae
Pathway
rht00300
Lysine biosynthesis
rht00470
D-Amino acid metabolism
rht01100
Metabolic pathways
rht01110
Biosynthesis of secondary metabolites
rht01120
Microbial metabolism in diverse environments
rht01230
Biosynthesis of amino acids
Module
rht_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rht00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NT26_3551 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NT26_3551 (dapF)
Enzymes [BR:
rht01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NT26_3551 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
CCF21273
UniProt:
L0NJK9
LinkDB
All DBs
Position
complement(3471610..3472500)
Genome browser
AA seq
296 aa
AA seq
DB search
MNGLGNKILVVDMRGRTDTVTPQAAIALNADPATQFDQIMAIHDPKAEGTDAWIDILNSD
GSKAQACGNGTRCVVQALAAETGRKAFTFQTVAGILNAAEHEDGSISVDMGKPVFAWNRI
PLSEEFFDTSRIELQIGPIDAPVLHSPSAMSMGNPHAIFWVDKDPMAFDLERFGPLLENH
PMFPEKANITLAQVTSKGSLRTRTWERGAGLTLACGSAACAAAVSAARTGRTGRRVEIDV
ASSSIRQPLVIEWRDDDHVIMTGPAEWEWSGKVDPATGCFNRDLEPENHGQGAQAN
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggcttggcaacaagatcctcgtcgtcgacatgcgcggccggacggacacggtc
acgccccaagcggcgattgccttgaatgccgatcctgcaacgcagttcgaccagatcatg
gcaatccatgatccgaaggccgaaggcacggatgcctggatcgacatcctgaactcggat
ggctccaaggcgcaggcctgcggcaacggcacacgctgcgtcgtgcaggcgctcgccgcc
gaaacggggcgcaaggccttcaccttccagacagttgctggcatcctgaacgccgccgaa
cacgaggacgggtcgatttccgtcgacatgggcaagccggtcttcgcttggaaccggatc
ccgctgtcggaggaattcttcgacacgagccgcatcgaactgcagatcggcccgatcgac
gcgccagtcctgcattcgccctcggccatgtcgatgggcaacccccatgcgatcttctgg
gtcgacaaggacccgatggcgttcgatctcgaacgcttcgggccgcttctcgaaaaccac
ccgatgttccccgagaaggcaaacatcacgctggcccaggtcacctcgaagggctctctg
cgcacccgcacgtgggagcgtggtgccggcctgacgctcgcctgcggttcggctgcctgt
gcggccgccgtctccgccgcccgcaccggccgtactggtcgcagggtcgagatcgacgtc
gcctccagctctatccgccagccgctggtgatcgagtggcgcgacgacgatcatgtcatc
atgaccgggcctgcggaatgggaatggtcgggcaaggtcgatcccgccaccggctgcttc
aaccgcgatctggagccggaaaaccacgggcagggggctcaggcgaattga
DBGET
integrated database retrieval system