Pseudorhizobium banfieldiae: NT26_3573
Help
Entry
NT26_3573 CDS
T04765
Name
(GenBank) putative exodeoxyribonuclease III (xthA)
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rht
Pseudorhizobium banfieldiae
Pathway
rht03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NT26_3573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rht03400
]
NT26_3573
Enzymes [BR:
rht01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NT26_3573
DNA repair and recombination proteins [BR:
rht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NT26_3573
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
CCF21295
UniProt:
L0NJP9
LinkDB
All DBs
Position
complement(3488252..3489055)
Genome browser
AA seq
267 aa
AA seq
DB search
MTFSITTWNINSVRLRMPIVEQFIVRHQPDILCLQEIKCQEHEFPLQPLKDLGYQHIIIH
GQKGYHGVAIASRVPLTEDHRQNYCGVGDARHISAIFERGSRRIRLHNFYVPAGGDEPDR
AVNPKFGHKLDFVEEMKCLKADPTPGISSILVGDLNIAPLEHDVWSHKKMLKIISHTPVE
TEGLLEVMSKGNWLDLMRQHVPDTEKLYTWWSYRAKDWAAADRGRRLDHVWSSQDLGPFL
DRIEVLKEARGWNQPSDHVPVTAVFRF
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgacattctccatcaccacctggaacatcaattcggtgcggctgcgcatgcccatcgtc
gagcagttcatcgtgcgtcaccagccggacattctgtgcctgcaggagatcaagtgccag
gagcacgagttcccgctgcagccgttgaaggatctcggctaccagcacatcatcatccac
ggtcagaagggttatcatggcgtcgcgatcgcctcgcgggtgcccctcaccgaagaccat
aggcagaactattgcggcgtcggcgacgcccgccacatctcggcgatcttcgagcgcggt
tcgcgacgtatccggctgcataacttctacgtgccggccggtggcgacgagcctgaccgt
gccgtcaacccgaaattcggccacaagctggacttcgtcgaggagatgaagtgccttaag
gcagatcccacccccggcatctcctcgatcctcgtgggggacctcaacatcgccccgctc
gagcatgacgtgtggtcgcacaagaagatgctgaagatcatcagccatacgcctgtcgag
acggaaggtctgctcgaggtgatgagcaagggaaactggctggacctgatgcgccagcac
gtgccggacaccgagaagctctacacgtggtggagttaccgcgccaaggactgggcagca
gccgatcgaggccgccgtctcgaccacgtctggtcgtcacaggatctcggccccttcctc
gatcggatagaggttctgaaggaggcgcgcggatggaaccagccatccgaccatgtcccg
gtcacggccgtcttcaggttctga
DBGET
integrated database retrieval system
