KEGG   Pseudorhizobium banfieldiae: NT26_3835
Entry
NT26_3835         CDS       T04765                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III: epsilon subunit, 3-5 exonucleolytic proofreading function
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rht  Pseudorhizobium banfieldiae
Pathway
rht03030  DNA replication
rht03430  Mismatch repair
rht03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rht00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NT26_3835 (dnaQ)
   03430 Mismatch repair
    NT26_3835 (dnaQ)
   03440 Homologous recombination
    NT26_3835 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rht03032]
    NT26_3835 (dnaQ)
   03400 DNA repair and recombination proteins [BR:rht03400]
    NT26_3835 (dnaQ)
Enzymes [BR:rht01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NT26_3835 (dnaQ)
DNA replication proteins [BR:rht03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NT26_3835 (dnaQ)
DNA repair and recombination proteins [BR:rht03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NT26_3835 (dnaQ)
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1 Rv2179c-like
Other DBs
NCBI-ProteinID: CCF21557
UniProt: L0NMK9
LinkDB
Position
3779461..3780189
AA seq 242 aa
MREIIFDTETTGLETKLDRIIEIGGIELINNFPTGRSLHLYINPGDRKVHPDALAVHGIT
DEFLKDKPSFAEVAEQILEFFEGAKWIAHNANFDMGFINAEFERLKLPPVSMEHVVDTLA
LARRKHPMGPNSLDALCRRYGIDNAHRTKHGALLDSELLAEVYIEMTGGRQAALGLVGIE
TSATIIEIEEHVVGISGRPRPLPSRVSAAELAAHRALVGSLGAKAVWARYEAESPDMAIR
AS
NT seq 729 nt   +upstreamnt  +downstreamnt
gtgcgtgaaatcatcttcgatacggaaacgaccggtctggaaaccaagctcgaccgtatc
atcgagatcggcgggatcgaactcatcaacaatttcccgaccggacggtcgttgcatctc
tacatcaaccccggtgatcgcaaggttcacccggacgcgctggcggtccatgggatcacc
gatgaattcctgaaggacaagccgagtttcgccgaggtggcggaacagatcctcgaattc
ttcgaaggcgcgaagtggattgcccacaacgcgaacttcgacatgggcttcatcaacgcc
gagtttgaacgtttgaagcttccgccggtgtccatggagcatgttgtcgacacgcttgca
ctcgcacgccgcaagcatccgatggggcccaactcgctggatgcgctatgccgtcgatac
ggaatcgacaacgctcaccgcaccaagcacggcgcgctactcgactccgaactgctcgcg
gaagtctatatcgagatgacggggggccggcaggcggcgctcggcctcgtcggcatcgaa
acctcggcgacgatcatcgagatcgaggagcatgtggtcgggatctctggtcgtccccgg
ccgctgccgtcgcgcgtgagtgcggccgagcttgcggcgcaccgtgccctggttggttcg
cttggcgcaaaggcagtctgggcgcgctatgaagcagaaagcccggacatggcgatccgg
gcttcctga

DBGET integrated database retrieval system