Pseudorhizobium banfieldiae: NT26_3961
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Entry
NT26_3961 CDS
T04765
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase)
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rht
Pseudorhizobium banfieldiae
Pathway
rht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NT26_3961 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rht03019
]
NT26_3961 (pnp)
03016 Transfer RNA biogenesis [BR:
rht03016
]
NT26_3961 (pnp)
Enzymes [BR:
rht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NT26_3961 (pnp)
Messenger RNA biogenesis [BR:
rht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NT26_3961 (pnp)
Transfer RNA biogenesis [BR:
rht03016
]
Prokaryotic type
tRNA degradation factors
NT26_3961 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
CCF21683
UniProt:
L0NKT4
LinkDB
All DBs
Position
3910401..3912554
Genome browser
AA seq
717 aa
AA seq
DB search
MFDTHSVEIEWAGRPLKLETGKIARQADGAVLATYGETVVLATVVSAKSPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFPEGYKNDTQVVVTVIQH
DLENNPDILSMVATSAALTLSGVPFMGPIGGARVGYINGEYVLNPHLDEMDESTLDLVVA
GTQDAVLMVESEAKELPEDVMLGAVMFGHKGFQPVIDAIIKLAEVAAKEPRDFQPEDHSA
LEAEMLQHFEAELRDAYKITQKADRYAAVDAVKAKVKAHFFPEGMEPKYTPEVIGAVFKH
LQAKIVRWNILDTKNRIDGRDLETVRPIVSEVGILPRTHGSALFTRGETQAIVVATLGTG
EDEQYVDSLTGMYKERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPTAE
QFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPIAKPVAGIAMGLILEGERFAVLS
DILGDEDHLGDMDFKVAGTADGITSLQMDIKIAGITEEIMKVALGQAQGGRKHILNEMAN
AITESRGQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAKINIEDDGTVKIAS
SSGKEIEAARKWIHSIVAEPEVGAVYEGTVVKTADFGAFVNFFGARDGLVHISQLAADRV
AKTTDVVKEGDKVWVKLMGFDERGKVRLSMKVVDQATGQEIPQEKKEKKSEGGEAAE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatacgcattctgttgaaatcgagtgggccggacgtccgctcaagctggaaacc
ggcaagatcgcccgccaggcggacggtgccgtcctcgccacctacggcgagaccgtcgtt
cttgcgaccgttgtttcggccaaatcgccgaagccgggccaggacttcttcccgctgacc
gtcaactatcaggaaaagacctatgccgccggcaagattcctggcggctacttcaagcgt
gaaggccgcccgtcggagaacgagaccctcgtttcccgcctgatcgaccgcccgatccgt
ccgctctttccggaaggttacaagaacgacacgcaggtcgtcgtcacggtcatccagcat
gatctggaaaacaaccccgacatcctctccatggttgccacctcggcagccctgacgctt
tccggcgttcccttcatgggcccgatcggcggcgcgcgcgtcggctacatcaatggcgaa
tacgtgctgaacccgcatctcgacgagatggacgagtcgacactcgacctcgtcgttgcc
ggcacccaggacgccgtcctgatggtcgagtctgaagccaaggaactgccggaagatgtg
atgctcggcgccgtcatgttcggccataagggcttccagccggtcatcgacgcgatcatc
aagctcgcagaagtggctgccaaggagccgcgcgacttccagcccgaagatcactcggca
cttgaagccgaaatgctgcagcactttgaggcggaactgcgcgacgcctacaagatcacc
cagaaggccgaccgctacgccgccgtcgacgccgtcaaggccaaggtgaaggcgcacttc
ttcccggaaggcatggagccgaagtatacaccggaagtcatcggtgccgtcttcaagcac
ctgcaggcaaagatcgttcgttggaacatcctcgacaccaagaaccgcatcgacggccgt
gacctggaaaccgtccgtccgatcgtttcggaagtcggtatcctgccccgcacgcacggc
tccgccctgttcacccgcggcgaaacccaggcgatcgtggttgcgacgctgggcaccggc
gaagacgagcagtatgtcgactcactgaccggcatgtacaaggagcgcttcctgctccac
tacaacttcccgccctactcggttggtgagacgggccgcatgggttccccgggtcgtcgc
gagatcggccacggcaagctcgcatggcgcgccatccgcccgatgctgccgaccgccgag
cagttcccctacacgctgcgcgtggtttcggagatcaccgaatccaacgggtcgtcctcc
atggcaaccgtctgcggcacctcgcttgcgctgatggatgccggcgttccgatcgcaaag
ccggtggccggtatcgccatgggtctgatcctcgaaggtgaacgcttcgccgttctctcc
gacattctcggcgacgaggaccatctcggcgacatggacttcaaggtggcgggtacggcc
gacggcatcacctcgctgcagatggacatcaagatcgccggcatcaccgaagagatcatg
aaggtcgcactcggccaggcgcagggtggccgcaagcacatcctcaacgaaatggccaac
gccatcacggaaagccgtgggcagctgggcgaattcgctccacgcatcgaagtgatgaac
atcccggtcgacaagatccgcgaagtcatcggctcgggcggcaaggtcatccgcgaaatc
gtggaaaagaccggcgccaagatcaacatcgaggacgacggcaccgtcaagatcgcctcg
tcctccggcaaggagatcgaggcagcccgcaagtggatccattcgatcgttgcggaaccg
gaagtcggcgccgtctacgaaggaacggtcgtcaagaccgccgatttcggcgccttcgtc
aacttcttcggtgcgcgtgacggcctcgtgcatatctcgcagctcgcagccgaccgcgtt
gcaaagacgaccgacgtcgtcaaggaaggcgacaaggtctgggtgaagctgatgggcttc
gacgagcgcggcaaggttcgcctgtccatgaaggtcgtcgaccaagcgaccggtcaggag
atcccgcaggagaagaaggaaaagaagagcgaaggcggcgaagctgccgagtaa
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