Pseudorhizobium banfieldiae: NT26_4020
Help
Entry
NT26_4020 CDS
T04765
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rht
Pseudorhizobium banfieldiae
Brite
KEGG Orthology (KO) [BR:
rht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rht03016
]
NT26_4020
Enzymes [BR:
rht01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NT26_4020
Transfer RNA biogenesis [BR:
rht03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NT26_4020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CCF21742
UniProt:
L0NN33
LinkDB
All DBs
Position
complement(3973488..3974114)
Genome browser
AA seq
208 aa
AA seq
DB search
MMSSIRYHEGDISAADAARYTGDVAIDTETLGLVPRRDRLCVVQLSPGDGTADVIRIAAG
QKEAPNLVGLLADPSRRKIFHYGRFDIAVLFHTFGVTTTPVFCTKIASRLTRTYTDRHGL
KDNLKELLDIDVSKAQQQSDWAAETLSPAQLEYAASDVLYLHSLADRLTDRLRRDGRMEL
AAACFEFLPTRSKLDLLGWEETDIFAHS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcagcattcgctaccacgaaggtgatatttccgcggccgatgccgcccgctat
acgggtgacgttgcgatcgacaccgaaaccctcgggcttgttccccgtcgtgaccgcctc
tgcgttgtgcagctttcccccggcgacggaacggcggatgtcattcgcatcgccgccggc
cagaaggaagcgccgaacctcgtgggcctgcttgccgatccctcacgacgcaagatcttc
cactacggccgcttcgacatcgccgtcctcttccacaccttcggcgtcaccaccacgccc
gtcttctgcaccaagatcgcttcgcggctgacgcggacatatacggatcgtcatggattg
aaggacaacctgaaggagctcctcgacatcgacgtgtcgaaggcccagcagcagtcggac
tgggccgcggaaacgctctcgcccgcacagctggaatatgccgcatcggacgttctctac
ctgcattcgctcgccgaccggctgacagaccgtctccgccgggatggccgcatggagctg
gctgcggcatgtttcgaattccttccgacgcgctccaagctcgacctcttgggctgggaa
gaaaccgacatcttcgcgcacagttga
DBGET
integrated database retrieval system
