Pseudorhizobium banfieldiae: NT26_4035
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Entry
NT26_4035 CDS
T04765
Name
(GenBank) Putative DNA polymerase III (gamma and tau subunits)
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rht
Pseudorhizobium banfieldiae
Pathway
rht03030
DNA replication
rht03430
Mismatch repair
rht03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NT26_4035
03430 Mismatch repair
NT26_4035
03440 Homologous recombination
NT26_4035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rht03032
]
NT26_4035
03400 DNA repair and recombination proteins [BR:
rht03400
]
NT26_4035
Enzymes [BR:
rht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NT26_4035
DNA replication proteins [BR:
rht03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NT26_4035
DNA repair and recombination proteins [BR:
rht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NT26_4035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_16
AAA_30
AAA_14
AAA_5
AAA_19
AAA_18
AAA_24
TsaE
RuvB_N
SKI
SRP54
AAA_assoc_2
DUF815
RNA_helicase
CbiA
nSTAND3
ABC_tran
AAA_2
AAA_28
Rad17
Motif
Other DBs
NCBI-ProteinID:
CCF21757
UniProt:
L0NN43
LinkDB
All DBs
Position
complement(3988470..3990242)
Genome browser
AA seq
590 aa
AA seq
DB search
MVGQEPMVRTLTNAFETGRIAQAYMLTGVRGVGKTTTARILARALNYRTPEIDQPTIDLR
SPGEHCQAIMEGRHVDVIEMDAASHTGIDDIREIIEQVRYRPVSARYKVYIIDEVHMLST
QAFNGLLKTLEEPPEHVKFIFATTEIRKVPITVLSRCQRFDLRRISAADLVGLFTTILEK
EGIVADAEALSMIARAAEGSARDGLSLLDQAIAHGGGRVEAETVRGMLGLADRARIVDLF
EHVIRGDVTAALGEFESQYQAGANPVVVLTDLADFTHLVTRIKYIPEAAQDPSLSEVERV
RGQEFAHSVAVSTLSRIWQMLLKGIPEAENSSRPAGATEMVLIRLTHAAHLPAPEDAARR
LGELGNGEGHSLAPSGSGGGSVQASLQPPLNAQASAMSPAARAPAGGPTAMLKAVPSSEP
RELPVGRTEDLPAEKPASTVAVNSLQDIVDLCSKNRDPRLKALVRNFVRLVKLEPGRLDM
RMSDGGPATLPGELGVKLKEWTGIHWIVSLSNEAGEATLVEADANAREARLTDARADPDV
AAILAQFPGARITDVRIRAIEDDPVNEDIAAPAAAESAEGDILPGDDIEL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggtcggccaggagccgatggttcgtacgctcaccaacgccttcgagacgggccggatc
gcccaagcctacatgctgaccggtgtccgcggcgtcggcaagacgacgacggcgcgcatt
ctggcgcgcgcactgaattatcggacgcccgagatcgaccagccgacgatcgaccttcgc
agtccgggagaacattgccaggccatcatggaaggccggcatgtggacgtcatcgagatg
gacgccgcatcccataccggcatcgacgacatccgcgagatcatcgagcaggtgcgctac
cggccggtttcggcgcgctacaaggtctacatcatcgacgaagtccatatgctatccaca
caggccttcaacggtctgctgaagacgctggaagaaccgccggagcatgtgaagtttatc
ttcgcgacgacggaaatccgcaaggtcccgatcacggtactgtctcgttgccagcgcttc
gatctgcgccgcatcagcgctgccgatctcgtcggcctgttcaccaccatcctggagaag
gaaggcattgtcgcagatgcagaagccctgtcgatgatcgcacgggcagccgaaggctct
gcccgcgacggcctttcgctgctcgaccaggcgatcgcgcatgggggcggacgggtcgag
gccgagaccgtccgcgggatgctgggccttgccgacagggcgcgtatcgtcgatctcttc
gaacatgtcatccgtggcgacgtgacggcagcacttggcgagttcgagtcccagtatcag
gccggggccaatccggtcgtggtgctgacggacctcgccgacttcacgcatctcgtcaca
cgcatcaagtacatcccggaggcggcgcaggatccgtcgctgagcgaggtcgagcgggtt
cgcgggcaagaattcgcgcattcggttgccgtcagcaccctgtcgcgtatctggcagatg
ctgctaaagggcatcccggaggcggagaactcatccagacccgccggcgccacggaaatg
gtgctgatccggctgacccatgccgcccatcttcccgcaccggaggacgccgcgcgacgt
ttgggcgaactcggcaatggcgaaggccacagtctggcaccctccggcagtggcggcggg
agcgttcaggcaagcttgcaaccgccgctcaacgcccaggcctcggccatgtcgcccgcc
gctcgcgcgccggccggcgggcccaccgcgatgctgaaggccgtgcctagctctgaacca
cgcgaactgcccgtgggccgaaccgaggacctgccggcggagaagccggcttcgaccgtc
gccgtcaactcgttgcaggacatcgtcgacctctgctcgaagaaccgcgacccgaggctg
aaggccctggtgcgaaacttcgtgcggcttgtgaagctagagcccggtcggctggatatg
cgcatgagcgacggcgggccagcgacactccccggtgaactcggtgtaaagcttaaggaa
tggaccggcatacactggatcgtcagcctgagtaacgaggcaggcgaagcaacgctcgtg
gaggcggacgccaatgcccgcgaggcacggctcaccgatgcccgggccgatccggatgtt
gcggccatcctcgcgcagtttcccggtgcccgcataaccgacgtacgcatccgtgccatc
gaggacgatcccgtgaacgaagacatcgcggcaccggctgccgcagaatccgccgagggc
gacatcctgcccggcgacgacatcgaactataa
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