Pseudorhizobium banfieldiae: NT26_4069
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Entry
NT26_4069 CDS
T04765
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rht
Pseudorhizobium banfieldiae
Pathway
rht03030
DNA replication
rht03410
Base excision repair
rht03420
Nucleotide excision repair
rht03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NT26_4069 (polA)
03410 Base excision repair
NT26_4069 (polA)
03420 Nucleotide excision repair
NT26_4069 (polA)
03440 Homologous recombination
NT26_4069 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rht03032
]
NT26_4069 (polA)
03400 DNA repair and recombination proteins [BR:
rht03400
]
NT26_4069 (polA)
Enzymes [BR:
rht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NT26_4069 (polA)
DNA replication proteins [BR:
rht03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NT26_4069 (polA)
DNA repair and recombination proteins [BR:
rht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NT26_4069 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NT26_4069 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
IMS_HHH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
CCF21791
UniProt:
L0NLX8
LinkDB
All DBs
Position
4013388..4016393
Genome browser
AA seq
1001 aa
AA seq
DB search
MDDAGAPRYSIAMKKGDHLFLVDGSGFIFRAFHALPPLTRKSDGLPVGAVSGFCNMLWKL
LTDARDTSVGVTPTHFAVIFDYSAKTFRKDLYNAYKANRSEPPEDLIPQFGLIRQATRAF
NLPCIETEGFEADDIIATYARQAEAIGADVTIISSDKDLMQLVTPNVHMYDSMKDKQIGI
PEVIEKWGVPPEKMIDLQAMVGDSVDNVPGIPGIGPKTAAQLLEEFGDLDTLLARAAEIK
QVKRRENIVANAELARLSRRLVELRTDAPLDMPLDALVLEPQNGPKLIGFLKAMEFGTLT
RRVAEACDCDASAIEPAHVQVEWGAAARGPDLDAGTSSAEPRVATPAGGKAGTTDPYGNS
TPAELAKARAEAFAAAKIDKSCYVTIDDLEDLDDWLRSARETGLVAFEAEGTSIDPMLSD
VVGISLALADNSRNPSGLDVRAAYIPFGHKTGSNDLLGNGRADNQLTAAEVMERLKPLLE
DASVLKVGHNLKYAYLLLKRYGIEIAAYDDVMLMSYVLEAGRGGHSLDSLSDRWLGHMPV
SFKDVAGTGKSGVSFDMVEIDRATVYAAEKADLTLRLAMVLKPRLVADRLMRVYERLERP
MVSTLARMEERGITVDRQILSRLSGELAQKAAAIEDEIYEIAGERFTIGSPKQLGDILFG
KMGLPGGAKTKTGQWSTSAQVLEDLAAAGHEFPRKIVDWRQLTKLKSTYTDALPGYIHPQ
TKRVHTSYSLASTTTGRLSSVEPNLQNIPIRTTEGRKIRTAFIATSGHKLVSADYSQIEL
RVLAHVADIPQLRQAFADGIDIHAMTASEMFGVPVEGMPSEIRRRAKAINFGIIYGISAF
GLANQLSIERSEAGEYIKKYFERFPGIRDYMDSTKEFAREHGYVETIFGRRAHYPEIRSS
NPQVRSFNERAAINAPIQGSAADIIRRAMVRMEPALQSANLSARMLLQVHDELIFEVEDG
EIEKTLPVITATMEQAAMPAIAMKVPLKVDARAASNWDEAH
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgcgggtgccccacgctattccatagccatgaaaaaaggtgatcacctcttc
cttgtcgacggctccggcttcatcttccgggcgttccacgcccttcccccactgacccgc
aagtccgacggcctgcccgtgggggcggtctcgggcttctgcaacatgctctggaagctg
ctcaccgatgcgcgcgacacctcggtcggggtgacgcccacgcattttgccgtgatcttc
gactattccgcgaagaccttccgcaaggacctctacaacgcctacaaggcgaaccgttcc
gagccgccggaagacctgatcccgcagttcgggctgatccgccaggcaacgagggcattc
aaccttccctgtatcgagaccgaaggcttcgaggcggacgacatcattgccacctatgct
aggcaggcggaagcgatcggcgctgacgtcacgatcatctcgtccgacaaggacctgatg
cagctcgtgaccccgaatgtccacatgtatgacagcatgaaggacaagcagataggcata
ccagaagtcatcgagaaatggggtgtgccgcctgagaagatgatcgacctgcaggcaatg
gtcggggattccgtcgacaatgtccccggcattcccgggatcggcccgaagaccgcagcc
cagctcctggaggagttcggcgacctcgatacgcttctcgcccgtgctgcggagatcaag
caggtcaagcggcgtgagaacatcgttgccaatgcggaactggcacgcctgtcgcgccgg
ctcgttgaactgcggacggatgcaccccttgatatgccgctggatgctctcgtgctggag
ccgcagaacggaccgaagctgatcggtttcctgaaggccatggaattcgggacgttgacg
cgccgtgtggcggaggcctgcgactgcgatgccagcgcgatcgagccggcgcacgtgcag
gtcgaatggggagcggcggcgcgggggccggatctcgatgccggcaccagcagtgccgag
cccagggtagcgacgcctgccggtggcaaggccggcacaactgacccctacggcaacagt
accccggcggaacttgccaaggcacgagctgaggccttcgcggcggcgaagatcgacaag
agctgctacgtcacgatcgacgatctggaggacctggacgattggctccggtcagcccgg
gaaaccggactggtggcttttgaagccgagggaacgtccatcgacccgatgctgtcggat
gtcgtggggatctcgctggcgctcgcggacaatagccgtaatccgtccggtctcgacgtc
cgggccgcctatatccccttcggccacaagactggaagcaatgatctgctcggcaatggc
cgtgccgacaatcagctgaccgccgccgaggtgatggagcggctgaagcccctgctcgaa
gatgcttccgtcctcaaggtcgggcataacctgaaatatgcctatctgctcctcaagcgg
tacgggatcgaaatcgccgcctatgacgacgtgatgctcatgtcctacgtcctggaggca
ggcaggggcggacacagcctcgattcgctctccgaccgctggcttggccatatgccggtc
tcattcaaggatgtcgcggggacgggcaagtctggcgtgagcttcgatatggtcgagatc
gaccgggctacggtctacgccgccgaaaaggcggatctcaccctcaggcttgccatggtt
ctgaaaccgcggctggtcgccgaccgattgatgcgcgtctatgagcggctggagcggccg
atggtctccacgctcgcccgcatggaggagcgcggcatcacggtcgaccgccagatactc
tctcggctgtccggggagctcgcgcaaaaggccgcggcgatagaggacgagatctacgag
atcgccggcgagcgcttcacgatcggctcaccgaagcagctgggcgacatcctgttcggc
aagatgggcctgccgggcggggcaaagacgaagacgggccagtggtccacctcggcgcag
gtgctggaagacctggctgcggccgggcacgagtttccgcgcaagatcgtcgactggcgg
caactgaccaagctcaagtctacctatacagacgctctgccgggctacatccacccgcag
acaaagcgcgttcacacgtcctattcactggcatcgacgacaaccgggcgtctttcgtcg
gtcgagccgaacctgcagaacatcccaatccgcacgaccgaaggacggaagatccgcacc
gccttcatcgccacatccggccacaagcttgtctctgccgactacagccagatcgaactg
cgggtactcgcccatgtcgctgacatcccgcaactgcgccaggcgtttgcagacggcatc
gacatccacgcgatgaccgcctcggaaatgttcggggtaccggttgagggcatgccaagc
gagatccgccgccgcgccaaggcgatcaacttcggcatcatctacggcatctccgccttc
ggtctggcgaaccagctctccatcgagcgctccgaagcaggcgagtacatcaagaagtat
ttcgagcgattccccggcatccgcgactacatggacagcaccaaggaattcgcgcgcgag
cacggctacgtcgaaaccatcttcggtcgccgggcgcactatccggagatacggtcctcc
aatccgcaggtgcgctccttcaacgaacgggctgccatcaacgcgcccatccaggggtcg
gccgccgacatcatccgccgggccatggtcaggatggaaccggctctccaatctgccaac
ctgtctgcccgcatgctcctgcaggtccatgacgaactgatcttcgaagtggaagacggc
gagatcgagaaaacgctgcccgtcatcacggcgaccatggagcaggcggctatgccggcg
atcgccatgaaggtgccgctgaaggtcgatgcgcgcgcagcctcaaactgggacgaggcg
cactag
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integrated database retrieval system
