Pseudorhizobium banfieldiae: NT26_p10222
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Entry
NT26_p10222 CDS
T04765
Name
(GenBank) Putative methylase/helicase; SBNO-like DNA-binding domain, ATP-hydrolysing
KO
K26273
protein strawberry notch
Organism
rht
Pseudorhizobium banfieldiae
Brite
KEGG Orthology (KO) [BR:
rht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rht03036
]
NT26_p10222
Chromosome and associated proteins [BR:
rht03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
NT26_p10222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
HisG
Motif
Other DBs
NCBI-ProteinID:
CCF22244
UniProt:
L0NMY0
LinkDB
All DBs
Position
NT26_p1:188593..193047
Genome browser
AA seq
1484 aa
AA seq
DB search
MNELWSLTVPNVPIAALFAPPCTVTQILAVAEALQPALSAGQPIDTGLLRAEMERAFGRS
DAAGAWDWKLAYEAGEAALVLFLRKFGRALLARAGSPAALLPILTRVSALLPTHTRRSEE
MELYQQFSTPLLMGLAALAAAQITPRDVVLEPSAGTGLLAVLAEISGGSLALNELAETRA
DLLRLLFPGRPVTTFDAAQIDDHLDTSLCPSVILMNPPFSAVANVDGRTTEATARHLRSA
LARLAPGGRLVAITGAGFAPDAPAWSETFGRLTETAHLVFTGAVSGSAFAKHGTSFETRI
SVFDKCRGGELGGITANLSQPMSSDVSQLLSRIAAKVPPRLELDAGTVARIHPTSSFRGI
PARASGTATRRSHTTPSAKTDANVAAPDAEDLAYTLRQTMDDFGAARLSDAIYETFRLQA
IEIPGAAPHPTKLVQSAAMASVAPPKPSYRPKLPTTVLRNGLLSDAQLETVIYAGEAHGA
HLAGSWCVDEAGDMVSAAPDNDIDSVRFRRGFFLGDGTGAGKGRQSAGILLDNWCQGRRK
ALWISKSDKLLEDAQRDWSALGQERLLVTPLSRFAQGRDIPLAEGILFTTYATLRSEERG
AKKSRVDQIVGWLGADFDGVILFDESHAMANAAGSKGERGDTEASQQGRAGLRLQHKLPN
ARVVYVSATGATTVHNLAYAQRLGLWGGVGPSACAPGVQDWQSSTGASPAPLGHHPSLPF
ATRAEFVEAIEAGGVAAMEVLARDLRSLGLYTARSLSYDGVEYEMLEHALTPEQRGIYDA
YALAFGVIHRNLAAALEAANITGEAGTLNRQAKSAARSAFESAKQRFFGHLLTSMKTPTL
ISSIEADLAAGHAAVIQIVSTGEALMERRLADIPTDEWNDVRIDITPREACLDYLAHSFP
VQLYEPFTDSEGNLSSRPVVRDGQPVECREAVRRRDALIEHLASLPPVPGALDQIVQRFG
TDLVAEVTGRSRRIVRKGEGPAARLVVESRAGSSNLSETAAFMDDQKRILIFSDAGGTGR
SYHADLGAKNQRLRVHYLLEPGWKADAAIQGLGRTNRTNQAQPPLFRPVATDVKAEKRFL
STIARRLDTLGAITRGQRQTGGQGLFRPEDNLESPYARDALRQLYRRIYRGDVAGSSLGA
FEDATGLSLTDDNGLKDDLPPITTFLNRLLALTIDMQAVLFSAFEELLDQRIEGAIAAGI
YDLGLETLRAESFRVTDARVIYTRPGSGTESQLLTIAEKRRNTPTSLADALDWLNDPKAR
LLVNSRSGRAAVQVPATSLMLDDGTIEPRLRLIRPTETGTLPAKIMEDTNWLEADRAAFA
AAWTAELAEVPEFSEATLHIVAGLLLPIWKQLPQDETRVYRLQTDEGQRIIGRRVSPAWV
ATTLAADAPTLSAAQVHALVLEGKTVARLAEGMELYRSRVMGVNRIELSGFSEAAKDRLK
ADGFFSEIISWKLRLFCPTDTSGIAVLERLLARIPVTGLHARNG
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaactttggtctttgaccgtaccgaatgtgccgattgccgcgctgttcgctccg
ccttgcaccgtcacccaaatcctcgccgtcgctgaagcgttgcagcccgcgctttcggcg
ggccagcctatcgacaccggcctgctgcgcgccgagatggagcgcgccttcggccgctcc
gatgcggcgggggcctgggactggaaactggcctatgaggctggcgaagccgcgctcgtc
ctcttcctgcggaagtttggccgtgcgcttctcgcgcgggccggatcgcccgcggccttg
cttccgatcctgacccgggtgtcggccctcctgcccacgcatacgcggcgctcggaagaa
atggagctctaccagcagttctcgacgccgctgctcatgggactcgcggcccttgccgcc
gcgcagattacgccccgcgatgtggtcctcgagccttctgccgggaccggacttctggct
gtcctcgcggaaatttcgggcggcagcctcgccctgaacgaactggccgagacccgcgct
gatcttctgcgcctcctctttccggggcgacccgtcaccaccttcgacgccgcgcagatc
gacgatcatctcgacacgagcctgtgcccgagcgtcatcctgatgaacccgccgttctcg
gccgtggccaatgtcgatggccggacgaccgaggcgacggcgcggcatctccgctcggcc
cttgcccgccttgctcccggtggacggctggtggccatcaccggggcgggcttcgcccct
gacgctccggcctggtccgagaccttcggccgcctgaccgagaccgcgcatctcgtcttc
accggcgcggtgtcgggctcggcctttgccaaacacggcaccagcttcgagacgcgcatt
tcggtcttcgacaaatgccgtggtggcgagttgggcggcatcaccgcaaatctgagccaa
cccatgtcttctgacgtgtcgcagctcctgtctcggattgcggccaaagtcccgccgcgc
ctcgagttggatgcgggcacggtcgcccggatccatcccacttcctctttccgggggatt
cctgcccgtgcgtccggcactgccactcgacgctcgcatacaacgccgtcggccaagacc
gatgcgaatgtcgccgcgccggatgccgaagacctcgcctacactctgcgtcagacgatg
gacgatttcggcgctgcgcgcctgtccgacgccatctacgagaccttccgccttcaggcc
atcgaaatccccggcgcggcaccgcacccgaccaagctggtgcagtccgccgccatggct
tccgtcgcgcccccgaaacccagctaccgccccaagctgcccaccaccgtcttgcgcaat
ggccttctgtccgacgcccagctcgagaccgtgatctatgcgggcgaggcgcatggcgcg
catcttgccggatcgtggtgcgtcgatgaggccggcgacatggtctcagcagcgccggac
aatgacattgactccgtccgcttccgccgtggcttcttcctcggagacggcaccggcgcg
ggcaagggccgccagtcggccgggatcctgctcgacaactggtgccagggccgccgcaag
gcgctctggatttcgaagagcgacaagcttctcgaggatgcgcaacgcgactggtcggcc
ctgggtcaggagcgcctgctggtgaccccgctctcgcgcttcgcccaaggtcgcgacatc
ccgctcgccgaaggcatcctcttcaccacctatgccacgctgcggtccgaagagcgcggc
gctaagaagtcccgcgtcgatcagattgtgggctggctcggggcggatttcgacggcgtg
atcctctttgatgaaagccacgccatggcaaatgccgccggatcgaagggcgagcgcggc
gataccgaggcctcgcagcagggtcgggcgggcctgcgccttcagcacaagctgcccaat
gcccgcgtggtctatgtctctgccacgggggcgacgacggtccacaatctcgcctatgcg
cagcggctcggcctctggggtggggtcgggccctccgcttgcgctccgggcgttcaggat
tggcaaagctccactggagcttcgcctgcccccttggggcaccatccttcactccccttc
gccacccgcgctgaattcgtcgaagccatcgaagcgggcggcgttgccgcgatggaagtc
ctcgcccgtgacctgcgctcgctcgggctctacaccgcccggtcgctctcatatgacggc
gtcgaatacgagatgctggagcatgccctgacccccgagcagcgcggcatctacgatgca
tacgcgctcgccttcggcgtgattcacagaaatttggccgcagctttggaggcggccaat
atcacaggtgaggctggtacgctgaaccgacaggccaaatctgccgcccgctcggccttc
gagtctgccaagcagcgcttcttcggccatttgctcacctcgatgaaaacccccaccctg
atttccagcatcgaggccgatctcgcggcgggccatgccgccgtcatccagatcgtctca
acgggcgaggcgttgatggagcgccgcctcgccgacattcccaccgatgagtggaacgat
gtcaggatcgacatcacgcccagggaggcgtgtcttgattaccttgctcattccttcccg
gtgcagctctacgagcctttcaccgacagcgagggcaacctctcctcccggcccgtcgtc
cgcgacggccagccggtcgaatgccgcgaggccgtgcgacggcgcgacgcgctgatcgag
catctggcgtcactgccgcccgtcccgggggcgctcgaccagatcgtgcagcgcttcggc
accgatcttgtggcagaagtcactggtcgctcgcgtcgcatcgtgcggaagggcgagggt
cctgcggcccgccttgtcgtggaaagccgggctggctcgtccaacctgtccgagaccgcc
gccttcatggacgaccagaagcggatcctgatcttctcggatgccggtggcacagggcgc
agctaccatgccgatcttggggccaagaaccagcgtctgcgggttcattacctcctcgag
cccggctggaaggccgatgcggccatccaaggtttgggacggaccaaccgcaccaaccag
gcgcagccgccgctgttccggccggtcgccacggatgtgaaagcagagaagcgcttcctc
tcgaccatcgcccgccgcctcgacacgctcggcgccatcacgcgcggccagcgccagacc
ggcgggcaggggctgttcaggccagaggacaacctcgagtcgccttacgctcgggatgcc
ctgcgtcagctctaccgccgcatctatcgcggcgatgtcgcgggcagctcgctcggggcc
ttcgaggatgcgacgggcctcagcctgaccgatgacaacgggctgaaggacgatctgcca
cccatcacgaccttcctcaatcgcctgctggcgctgacgatcgacatgcaggccgtgctc
ttctcggctttcgaggagcttctagaccaacggatcgagggggccatcgccgccgggatc
tatgatctcgggctcgagacgctgcgtgccgagagcttccgcgtcacggatgcgcgcgtc
atctacacccgtcccgggtccggtaccgagtcccagctcctgaccatcgcggaaaagcgg
cgcaacacgccgacttctctcgcggatgccctcgattggctcaacgacccgaaggcacgc
ctgctggtcaacagccgctcgggtcgggcggcggtgcaggtgccagctactagcctgatg
ctggatgatggcaccatcgaaccgcgcctgcggctgatccgtccgacggagaccggcacc
ctcccggccaagatcatggaggacacaaactggctcgaggctgaccgcgcggccttcgcc
gccgcctggaccgccgaactggctgaggtgccagagttttccgaagccacgctgcacatc
gtcgcgggtcttctgctgccgatctggaagcagcttccccaggacgaaacccgcgtctac
cggctgcagaccgatgagggtcagcgcatcatcggccgccgcgtctcgcccgcctgggtc
gcgaccacgctcgccgccgacgcgccaacgctctcggcggcgcaggtccatgccctcgtt
ctcgagggcaagaccgtggcgcggttggccgagggaatggaactctaccgctcccgggtc
atgggggtgaaccggatcgagctttccggtttctccgaggccgccaaagaccgacttaag
gctgacggcttcttctcggagatcatcagctggaagttacgcctgttctgcccgacagac
accagcggcatcgccgtcctggagcgcctgcttgcacgcatcccggtcaccggcctacat
gcacgcaatggttga
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