Rhodococcus sp. PBTS 1: A3Q40_00112
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Entry
A3Q40_00112 CDS
T05182
Symbol
xthA
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rhu
Rhodococcus sp. PBTS 1
Pathway
rhu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A3Q40_00112 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhu03400
]
A3Q40_00112 (xthA)
Enzymes [BR:
rhu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
A3Q40_00112 (xthA)
DNA repair and recombination proteins [BR:
rhu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
A3Q40_00112 (xthA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
DUF7979
Motif
Other DBs
NCBI-ProteinID:
AMY17527
LinkDB
All DBs
Position
complement(120912..121781)
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AA seq
289 aa
AA seq
DB search
MRLATWNVNSVRSRVDRIVDWLGRSDVDVLAIQETKCKDEQFPYQRFADIGYEVAHVGHS
QWNGVAIASRVGLTDVRTEFEHQPGFHKDPAETPVVEARALGAVCGGVRVWSLYVPNGRT
LDDPHYRYKLDWLAALRDDARSWLDADPQAQVALVGDWNVAPTDDDVWDPALFEGRTHTS
PAERAAFEAVVDAGYADVVRPFTPGPGVYTYWDYTQLRFPRREGLRIDFVLASPALAARV
AGAEIDRQERKGKGASDHAPVVVDLSAASETRSASAASATRSASAASGS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcgccacgtggaacgtcaattccgtccgctcccgggtcgaccggatcgtggac
tggctggggcgctccgacgtcgacgtcctggcgatccaggagaccaagtgcaaggacgag
cagtttccctaccagcgcttcgcggacatcggctacgaggtcgcccacgtggggcacagc
cagtggaacggcgtcgcgatcgcctcgcgggtgggcctgacggacgtgcgcacggagttc
gagcaccagcccgggttccacaaggacccggcggagacgccggtggtcgaggcccgcgcg
ctgggcgccgtctgcggtggggtgcgggtgtggagcctgtacgtccccaacggccgcacc
ctcgacgatccgcactatcgctacaagctcgactggctcgccgcgctgcgggacgacgcc
cggtcatggttggacgccgatccgcaggcgcaggtggcgttggtcggcgactggaacgtc
gccccgacggacgacgacgtgtgggatcccgcgctgttcgagggccggacgcacacgtcc
ccggccgagcgggcggcgttcgaggccgtcgtcgacgccggatacgcggacgtcgtgcgg
ccgttcacaccgggaccgggcgtctacacgtactgggactacacgcagctgcgcttcccg
cgccgcgagggtctgcgcatcgacttcgtcctcgcctcaccggccctcgccgcgcgggtc
gccggcgcggagatcgaccggcaggagcgcaaaggcaagggtgcgagcgatcacgcgccc
gtggtggtggacctctcggcggcctccgagacacggtcggcctccgcggcctcggccaca
cggtcggcctcggcggcctccggatcctga
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